Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27921 | Canola | cytosol | 95.58 | 97.3 |
| AT4G17486.1 | Thale cress | cytosol | 89.82 | 90.62 |
| CDY09624 | Canola | cytosol | 82.74 | 86.98 |
| CDX90471 | Canola | cytosol | 82.3 | 86.92 |
| CDY64684 | Canola | cytosol | 73.01 | 67.9 |
| CDX77757 | Canola | cytosol | 72.57 | 67.49 |
| KRH28159 | Soybean | cytosol | 61.06 | 61.61 |
| PGSC0003DMT400067477 | Potato | cytosol | 59.73 | 61.09 |
| KRH77327 | Soybean | cytosol | 59.73 | 60.27 |
| Solyc08g078220.2.1 | Tomato | cytosol | 58.85 | 60.18 |
| KRH04183 | Soybean | cytosol | 59.29 | 60.09 |
| KRH57475 | Soybean | cytosol | 58.85 | 59.64 |
| GSMUA_Achr4P30040_001 | Banana | mitochondrion | 57.52 | 58.04 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.54 | 56.28 |
| EES11216 | Sorghum | cytosol | 49.56 | 53.85 |
| Zm00001d026190_P001 | Maize | cytosol | 49.56 | 53.85 |
| Os04t0548000-01 | Rice | cytosol | 48.67 | 53.14 |
| Zm00001d002758_P002 | Maize | cytosol | 48.67 | 52.63 |
| Zm00001d017468_P001 | Maize | cytosol | 47.79 | 51.67 |
| EES07522 | Sorghum | cytosol | 47.35 | 51.2 |
| TraesCS6D01G225900.1 | Wheat | cytosol | 46.02 | 50.73 |
| TraesCS6A01G243700.2 | Wheat | cytosol | 45.58 | 50.49 |
| TraesCS6B01G280600.1 | Wheat | cytosol | 45.58 | 50.24 |
| TraesCS2A01G416700.1 | Wheat | cytosol | 46.46 | 50.24 |
| TraesCS2B01G435700.2 | Wheat | cytosol | 46.02 | 50.0 |
| EER95706 | Sorghum | mitochondrion | 51.77 | 50.0 |
| Os02t0655500-01 | Rice | cytosol | 44.69 | 49.51 |
| TraesCS2D01G413700.1 | Wheat | cytosol | 46.46 | 49.3 |
| Os03t0100900-01 | Rice | plastid | 52.65 | 48.57 |
| TraesCS5A01G543200.2 | Wheat | cytosol, peroxisome, vacuole | 49.56 | 48.28 |
| TraesCS4B01G376300.2 | Wheat | vacuole | 50.0 | 47.68 |
| HORVU0Hr1G009550.1 | Barley | cytosol, peroxisome, plasma membrane | 50.0 | 47.08 |
| GSMUA_Achr1P00440_001 | Banana | mitochondrion | 53.54 | 44.16 |
| CDY65538 | Canola | cytosol, mitochondrion | 41.59 | 42.73 |
| CDY65539 | Canola | cytosol, mitochondrion | 41.59 | 42.73 |
| CDX88162 | Canola | cytosol, mitochondrion | 41.59 | 42.73 |
| CDY07077 | Canola | cytosol, mitochondrion | 41.15 | 42.27 |
| CDY05475 | Canola | mitochondrion | 39.82 | 41.67 |
| CDY05376 | Canola | cytosol, mitochondrion | 39.38 | 41.2 |
| HORVU2Hr1G098080.1 | Barley | peroxisome | 46.9 | 40.61 |
| Zm00001d027266_P001 | Maize | mitochondrion, plastid | 50.88 | 38.72 |
| CDY39951 | Canola | cytosol | 38.94 | 38.6 |
| CDX76766 | Canola | nucleus | 39.82 | 38.14 |
| CDY10616 | Canola | cytosol, nucleus, peroxisome | 42.04 | 37.85 |
| CDX75209 | Canola | nucleus | 38.5 | 37.83 |
| CDY62507 | Canola | nucleus, plasma membrane | 40.27 | 37.76 |
| CDX87334 | Canola | cytosol | 38.5 | 37.5 |
| CDX67961 | Canola | cytosol | 37.61 | 37.28 |
| CDY35370 | Canola | nucleus, plasma membrane | 40.27 | 36.99 |
| CDX79359 | Canola | cytosol | 37.17 | 36.84 |
| CDY17002 | Canola | nucleus | 44.69 | 35.94 |
| CDY25677 | Canola | nucleus | 42.48 | 35.69 |
| CDY17812 | Canola | nucleus | 43.81 | 35.23 |
| CDY23657 | Canola | nucleus | 42.04 | 33.93 |
| GSMUA_Achr5P12520_001 | Banana | plastid | 52.21 | 32.33 |
| CDX68806 | Canola | nucleus | 38.5 | 28.06 |
| CDY49480 | Canola | cytosol | 22.57 | 20.16 |
| CDX94426 | Canola | cytosol | 22.12 | 19.84 |
| CDY66007 | Canola | cytosol | 22.12 | 19.68 |
| CDX89402 | Canola | cytosol | 21.24 | 19.12 |
| CDX94429 | Canola | cytosol | 19.91 | 18.37 |
| CDX89404 | Canola | cytosol | 19.91 | 18.37 |
| CDY56277 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 39.38 | 16.24 |
Protein Annotations
| EnsemblPlants:CDX76571 | EnsemblPlantsGene:GSBRNA2T00127013001 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | KEGG:00261+3.4.-.- | KEGG:00310+3.4.-.- |
| KEGG:00550+3.4.-.- | KEGG:00780+3.4.-.- | MEROPS:C97.A05 | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF35 | PFAM:PF05903 |
| ProteinID:CDX76571 | ProteinID:CDX76571.1 | SEG:seg | SMART:SM01179 | UniParc:UPI0004EECC13 | MapMan:19.4.1.7 |
Description
BnaA08g08290D
Coordinates
chrLK031807:+:2175219..2176588
Molecular Weight (calculated)
25706.9 Da
IEP (calculated)
4.637
GRAVY (calculated)
-0.487
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MWVPTLSSSS CSSDEREDNT GEEEARLTPV YLNVYDLTPV NNYLYWFGIG IFHSGIESHG LEYCYGAHEY PTSGVYEVEP KNCPGFIFRR SLLLGTTTMS
101: PSDFRSYMEK LSRKYHGDTY HLIAKNCNHF TEEVCFQLTG KPVPGWINRL ARVGSFCNCL LPESIQLTAV SAPSERLEFS DEDESNSEAS SLSDEEGPEH
201: RLINVADREV VYLQNKPVRL TREEIH
101: PSDFRSYMEK LSRKYHGDTY HLIAKNCNHF TEEVCFQLTG KPVPGWINRL ARVGSFCNCL LPESIQLTAV SAPSERLEFS DEDESNSEAS SLSDEEGPEH
201: RLINVADREV VYLQNKPVRL TREEIH
001: MWVPTLSSSS CSSDERDESS GEAALTPVYL NVYDLTPVNN YLYWFGIGIF HSGIEAHNLE YCYGAHEYPT SGVYEVEPRN CPGFIFRRSV LLGTTSMSRS
101: DFRSYMEKLS RKYHGDTYHL IAKNCNHFTE EVCLQLTGKP IPGWINRLAR VGSFCNCLLP ESIQLTAVSA LPERLEFSDE DESNSEASSV SDEEGSEQHL
201: INVADREIVY LQNKPVRLTR EEIP
101: DFRSYMEKLS RKYHGDTYHL IAKNCNHFTE EVCLQLTGKP IPGWINRLAR VGSFCNCLLP ESIQLTAVSA LPERLEFSDE DESNSEASSV SDEEGSEQHL
201: INVADREIVY LQNKPVRLTR EEIP
Arabidopsis Description
DeSI-like protein At4g17486 [Source:UniProtKB/Swiss-Prot;Acc:Q93VG8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.