Factsheet for Os03t0100900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0196500-01
Os02t0509600-01
Os05t0200280-01
Os06t0107000-01
Os07t0101400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17486.1	Os02t0509600-01	AT1G27300.1	21798944
AT4G17486.1	Os07t0101400-01	AT2G39760.1	21798944
AT4G17486.1	Os06t0107000-01	AT4G25660.1	21798944
AT4G17486.1	Os06t0107000-01	AT4G25680.1	21798944
AT5G47310.1	Os01t0196500-01	AT1G55190.1	21798944
AT5G47310.1	Os05t0200280-01	AT1G55190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95706	Sorghum	mitochondrion	74.29	77.78
TraesCS5A01G543200.2	Wheat	cytosol, peroxisome, vacuole	69.8	73.71
TraesCS4B01G376300.2	Wheat	vacuole	71.02	73.42
HORVU0Hr1G009550.1	Barley	cytosol, peroxisome, plasma membrane	69.8	71.25
GSMUA_Achr4P30040_001	Banana	mitochondrion	57.55	62.95
Zm00001d027266_P001	Maize	mitochondrion, plastid	74.29	61.28
GSMUA_AchrUn_...	Banana	cytosol	53.06	60.47
Os04t0548000-01	Rice	cytosol	50.2	59.42
KRH28159	Soybean	cytosol	53.06	58.04
PGSC0003DMT400067477	Potato	cytosol	52.24	57.92
Os02t0655500-01	Rice	cytosol	48.16	57.84
KRH77327	Soybean	cytosol	52.65	57.59
Solyc08g078220.2.1	Tomato	cytosol	51.84	57.47
KRH04183	Soybean	cytosol	52.24	57.4
KRH57475	Soybean	cytosol	51.84	56.95
CDY27921	Canola	cytosol	49.39	54.5
Bra012661.1-P	Field mustard	cytosol	47.35	54.21
CDX90471	Canola	cytosol	47.35	54.21
AT4G17486.1	Thale cress	cytosol	49.39	54.02
CDY09624	Canola	cytosol	47.35	53.95
CDX76571	Canola	cytosol	48.57	52.65
GSMUA_Achr1P00440_001	Banana	mitochondrion	58.78	52.55
AT5G47310.1	Thale cress	cytosol	52.24	52.24
CDX77757	Canola	cytosol	51.43	51.85
Bra024951.1-P	Field mustard	cytosol	51.43	51.85
CDY64684	Canola	cytosol	51.43	51.85
Os06t0560400-01	Rice	cytosol	42.86	48.61
Os03t0198500-01	Rice	mitochondrion	40.41	40.08
GSMUA_Achr5P12520_001	Banana	plastid	57.14	38.36
Os06t0182100-00	Rice	plastid	33.47	31.3
Os10t0533900-01	Rice	cytosol, nucleus, peroxisome	22.86	22.76
Os06t0107000-01	Rice	cytosol, nucleus	22.04	20.0

Protein Annotations

EMBL:AK061783	EMBL:AK103335	EnsemblPlants:Os03t0100900-01	EnsemblPlantsGene:Os03g0100900	EntrezGene:4331282	Gene3D:3.90.1720.30
InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF35	PFAM:PF05903	ProteinID:ABF93473.1	ProteinID:BAF10562.1
ProteinID:BAS81816.1	ProteinID:EEE58141.1	RefSeq:XP_015631193.1	SEG:seg	SMART:SM01179	UniParc:UPI0000DB4BD9
UniProt:Q10T56	MapMan:19.4.1.7	:	:	:	:

Description

Protein of unknown function DUF862, eukaryotic domain containing protein. (Os03t0100900-01);Protein of unknown function DUF862, eukaryotic domain containing protein. (Os03t0100900-02)

Coordinates

chr3:+:100746..104014

Molecular Weight (calculated)

26492.9 Da

IEP (calculated)

4.796

GRAVY (calculated)

-0.261

Length

245 amino acids

Sequence
(BLAST)

001: MRVLPASWSS AASSSASASA DRLNSPTPAP PPPAPPPPAP KSSSSSSAEL YLNIYDISPI NHYLYWFGLG IFHSGIEVHG MEYGFGAHEY PTSGVFQVEP
101: KSCPGFIFRR SVCVGSTDMS RSEVRSFIED LAEDYHGDTY HLIAKNCNHF TADICKRLTG KPIPGWVNRL ARLGSFCNCV LPESIKVSAV KDVTDPPEFP
201: DDDMESNASI VDGSDADDLD HLLITPSSDV VSSKDKILTP GRDSL

Best Arabidopsis Sequence Match ( AT5G47310.1 )
(BLAST)

001: MRVLGLSSSL CSGEDKEEEE INGEGSLTPV YLNVYDLTPV NNYLYWFGLG IFHSGIEAHG FEYGYGAHEY SSSGVFEVEP RSCPGFIFRR SVLLGTTSMS
101: RSDFRSFMEK LSRKYHGDTY HLIAKNCNHF TEEVCLQVTG KPIPGWINRM ARVGSFCNCI LPESIQLSSV NHPEALEFSD DNDGSEESVA SSVSYETDGE
201: GSDHHLITAP NSDIAYLQDR PVRLARELLQ EPTDDTSPQY LLKRS

Arabidopsis Description

At5g47310 [Source:UniProtKB/TrEMBL;Acc:Q9LVS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.