Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G365100.1 | Wheat | cytosol | 81.94 | 85.92 |
| TraesCS7B01G270200.1 | Wheat | cytosol | 81.94 | 85.92 |
| TraesCS7A01G357600.1 | Wheat | cytosol | 81.48 | 85.44 |
| EER89945 | Sorghum | cytosol | 82.41 | 84.36 |
| Zm00001d046249_P001 | Maize | cytosol | 77.31 | 79.15 |
| GSMUA_Achr5P06500_001 | Banana | cytosol, extracellular, peroxisome | 58.8 | 59.07 |
| GSMUA_Achr2P19400_001 | Banana | plastid | 56.02 | 55.76 |
| VIT_11s0016g04860.t01 | Wine grape | cytosol, nucleus, peroxisome | 54.63 | 55.14 |
| KRH03735 | Soybean | nucleus | 56.02 | 53.78 |
| PGSC0003DMT400002750 | Potato | cytosol | 53.24 | 51.34 |
| Solyc12g006880.1.1 | Tomato | cytosol | 53.24 | 51.34 |
| Os04t0548000-01 | Rice | cytosol | 49.07 | 51.21 |
| KRH63012 | Soybean | nucleus | 53.24 | 50.0 |
| KRH54877 | Soybean | cytosol, peroxisome | 43.06 | 49.21 |
| Os02t0655500-01 | Rice | cytosol | 45.83 | 48.53 |
| Os03t0100900-01 | Rice | plastid | 48.61 | 42.86 |
| Os03t0198500-01 | Rice | mitochondrion | 43.98 | 38.46 |
| Os06t0182100-00 | Rice | plastid | 32.87 | 27.1 |
| Os10t0533900-01 | Rice | cytosol, nucleus, peroxisome | 26.85 | 23.58 |
| Os06t0107000-01 | Rice | cytosol, nucleus | 23.61 | 18.89 |
Protein Annotations
| EMBL:AK103575 | EMBL:AK108074 | EnsemblPlants:Os06t0560400-01 | EnsemblPlantsGene:Os06g0560400 | EntrezGene:4341303 | Gene3D:3.90.1720.30 |
| InterPro:PPPDE_dom | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF13 | PFAM:PF05903 | ProteinID:BAD53736.1 | ProteinID:BAF19783.1 |
| ProteinID:BAS98247.1 | ProteinID:EEE65883.1 | RefSeq:XP_015641480.1 | SEG:seg | SMART:SM01179 | UniParc:UPI0000446E4E |
| UniProt:Q5Z918 | MapMan:19.4.1.7 | : | : | : | : |
Description
Protein of unknown function DUF862, eukaryotic domain containing protein. (Os06t0560400-01)
Coordinates
chr6:-:21431314..21435702
Molecular Weight (calculated)
23558.4 Da
IEP (calculated)
5.446
GRAVY (calculated)
-0.333
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGAVSGGGA GAAGAGAGAE GEGAYTVVLN VYDLTPLNNY LHWCGLGIFH SAVEVHGSEY SFGAHDHPTS GVFEVEPKCC PGFMYRCSIF IGRTSLNPLE
101: FRDFIQRMAS EYHGDTYHLI SKNCNHFTDD LSTRLTGKPI PGWVNRPAKL GAFCNCLLPE SMRLESTGTK HLADCHFSDD SRTSSNEHFE DEDLEDKHLL
201: SQSSVSEDAI VKEVHR
101: FRDFIQRMAS EYHGDTYHLI SKNCNHFTDD LSTRLTGKPI PGWVNRPAKL GAFCNCLLPE SMRLESTGTK HLADCHFSDD SRTSSNEHFE DEDLEDKHLL
201: SQSSVSEDAI VKEVHR
001: MWVPTLSSSS CSSDERDESS GEAALTPVYL NVYDLTPVNN YLYWFGIGIF HSGIEAHNLE YCYGAHEYPT SGVYEVEPRN CPGFIFRRSV LLGTTSMSRS
101: DFRSYMEKLS RKYHGDTYHL IAKNCNHFTE EVCLQLTGKP IPGWINRLAR VGSFCNCLLP ESIQLTAVSA LPERLEFSDE DESNSEASSV SDEEGSEQHL
201: INVADREIVY LQNKPVRLTR EEIP
101: DFRSYMEKLS RKYHGDTYHL IAKNCNHFTE EVCLQLTGKP IPGWINRLAR VGSFCNCLLP ESIQLTAVSA LPERLEFSDE DESNSEASSV SDEEGSEQHL
201: INVADREIVY LQNKPVRLTR EEIP
Arabidopsis Description
DeSI-like protein At4g17486 [Source:UniProtKB/Swiss-Prot;Acc:Q93VG8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.