Factsheet for Os10t0533900-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94588	Sorghum	cytosol	85.77	86.12
Zm00001d029725_P001	Maize	extracellular, mitochondrion	85.37	85.71
HORVU1Hr1G049520.3	Barley	cytosol, peroxisome, plastid	84.55	85.6
TraesCS1B01G205700.1	Wheat	cytosol, peroxisome, plastid	84.15	85.54
TraesCS1A01G184300.1	Wheat	cytosol	83.74	73.57
GSMUA_Achr8P12230_001	Banana	cytosol	71.54	71.54
GSMUA_Achr11P...	Banana	cytosol	71.54	71.26
TraesCS1D01G192400.1	Wheat	cytosol, peroxisome, plastid	81.3	71.17
VIT_16s0050g01050.t01	Wine grape	cytosol	67.07	67.9
KRH08874	Soybean	cytosol	66.26	66.53
KRH38387	Soybean	cytosol	65.45	64.92
HORVU1Hr1G049510.1	Barley	cytosol	34.55	63.43
KRH35244	Soybean	cytosol, peroxisome, plastid	50.41	51.67
Os06t0107000-01	Rice	cytosol, nucleus	53.66	48.89
PGSC0003DMT400018924	Potato	cytosol	39.84	46.23
Solyc02g082060.1.1	Tomato	cytosol	39.43	45.54
Os06t0560400-01	Rice	cytosol	23.58	26.85
Os02t0655500-01	Rice	cytosol	21.54	25.98
Os04t0548000-01	Rice	cytosol	21.54	25.6
Os06t0182100-00	Rice	plastid	26.83	25.19
Os03t0198500-01	Rice	mitochondrion	23.58	23.48
Os03t0100900-01	Rice	plastid	22.76	22.86

Protein Annotations

EMBL:AK073543	EMBL:AK104667	EnsemblPlants:Os10t0533900-01	EnsemblPlantsGene:Os10g0533900	EntrezGene:4349227	Gene3D:3.90.1720.30
InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF9	PFAM:PF05903	ProteinID:AAM88632.1	ProteinID:AAP54793.1
ProteinID:BAF27072.1	ProteinID:BAT11803.1	ProteinID:EEE51309.1	RefSeq:XP_015614742.1	SEG:seg	SMART:SM01179
UniParc:UPI00000A7A21	UniProt:Q8LN31	MapMan:19.4.1.7	:	:	:

Description

Protein of unknown function DUF862, eukaryotic domain containing protein. (Os10t0533900-01)

Coordinates

chr10:+:20768491..20777051

Molecular Weight (calculated)

27222.8 Da

IEP (calculated)

6.994

GRAVY (calculated)

-0.503

Length

246 amino acids

Sequence
(BLAST)

001: MKEVVLHVYD VTNSDSEKTN NTILQINRIF KDRIGLGGIF HSAVQVYGEE EWSFGFCENG SGVFSCPIGK NPMYTYRECI VLGETECSIA TVNRILRELS
101: REWPGHSYDL LSRNCNHFCD VLCERLAVPK LPGWVNRFAN AGDTAVVVAE NTAVKFRQAK TEIVNASRVA YRFMAGLASK NQNPQPESPS NQSRNGPTFQ
201: GTWFKNIISN GAKPSSSEST SSHDTGTGGD ESSLQNQKPS EQSTRL

Best Arabidopsis Sequence Match ( AT4G25680.1 )
(BLAST)

001: MTEVVLHIYD VTNSGSEKTN NTIVQINRFF KDGIGLGGIF HSAIQVYGND EWSYGYCELG TGVFSCPSGK NPMYTYREKI VLGKTDCTIF MVNQMLRELS
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAN AGDTALEVAG NTAMRMKQAK TELVSASKVA YRFLSNVTSN VTNGSNGSPQ RPGTLNNSDS
201: GNLRLQGSWL KGLLNTAKPS TSTEIGNKDE DANHAVTNQK KQSRDSDVLL FQ

Arabidopsis Description

At4g25680 [Source:UniProtKB/TrEMBL;Acc:Q9SZZ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.