Factsheet for GSMUA_Achr8P12230_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	87.4	87.04
EER94588	Sorghum	cytosol	73.17	73.47
Zm00001d029725_P001	Maize	extracellular, mitochondrion	72.76	73.06
VIT_16s0050g01050.t01	Wine grape	cytosol	71.95	72.84
HORVU1Hr1G049520.3	Barley	cytosol, peroxisome, plastid	71.54	72.43
TraesCS1B01G205700.1	Wheat	cytosol, peroxisome, plastid	71.14	72.31
Os10t0533900-01	Rice	cytosol, nucleus, peroxisome	71.54	71.54
KRH08874	Soybean	cytosol	69.11	69.39
KRH38387	Soybean	cytosol	68.29	67.74
GSMUA_AchrUn_...	Banana	cytosol	64.23	63.71
TraesCS1A01G184300.1	Wheat	cytosol	71.95	63.21
TraesCS1D01G192400.1	Wheat	cytosol, peroxisome, plastid	70.33	61.57
KRH35244	Soybean	cytosol, peroxisome, plastid	52.85	54.17
HORVU1Hr1G049510.1	Barley	cytosol	29.27	53.73
GSMUA_Achr11P...	Banana	cytosol	44.31	53.43
GSMUA_Achr5P06500_001	Banana	cytosol, extracellular, peroxisome	22.76	26.05
GSMUA_Achr4P30040_001	Banana	mitochondrion	23.58	25.89
GSMUA_Achr2P19400_001	Banana	plastid	22.36	25.35
GSMUA_Achr3P04560_001	Banana	mitochondrion	23.17	25.11
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	16.67	24.85
GSMUA_AchrUn_...	Banana	cytosol	21.54	24.65
GSMUA_Achr7P25980_001	Banana	mitochondrion	20.33	24.04
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	22.36	23.91
GSMUA_Achr4P01900_001	Banana	mitochondrion	21.14	23.01
GSMUA_Achr1P00440_001	Banana	mitochondrion	23.17	20.8
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	21.14	20.16
GSMUA_Achr11P...	Banana	mitochondrion	22.76	17.67
GSMUA_Achr5P12520_001	Banana	plastid	23.17	15.62

Protein Annotations

EnsemblPlants:GSMUA_Achr8P12230_001	EnsemblPlants:GSMUA_Achr8T12230_001	EnsemblPlantsGene:GSMUA_Achr8G12230_001	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378
PANTHER:PTHR12378:SF9	PFAM:PF05903	SMART:SM01179	UniParc:UPI000296DD21	UniProt:M0TPS6	MapMan:19.4.1.7

Description

ethylene-responsive element-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G12230_001]

Coordinates

chr8:+:8983622..8987771

Molecular Weight (calculated)

27309.1 Da

IEP (calculated)

7.500

GRAVY (calculated)

-0.448

Length

246 amino acids

Sequence
(BLAST)

001: MKEVVLHIYD VTNSGSEKTN NTILQINRIF KDRIGLGGIF HSAIQVYGDE EWSFGFCEQG SGVFSCPPGK NPMYTYREHI ILGETNCSIL KVNQILRELS
101: QAWPGHSYDL LAKNCNHFCD AFCERLGVQK LPGWVNRFAN AGDTAIVVAE NAALHLRQAK DEIVTASKVA YRFMAGLASN SRATPESPSY SNRGSPRFQG
201: AWFKNLMSIG AKPSAGTSEI PDETDDSPLY RQKPSELSQH NSRQNS

Best Arabidopsis Sequence Match ( AT4G25680.1 )
(BLAST)

001: MTEVVLHIYD VTNSGSEKTN NTIVQINRFF KDGIGLGGIF HSAIQVYGND EWSYGYCELG TGVFSCPSGK NPMYTYREKI VLGKTDCTIF MVNQMLRELS
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAN AGDTALEVAG NTAMRMKQAK TELVSASKVA YRFLSNVTSN VTNGSNGSPQ RPGTLNNSDS
201: GNLRLQGSWL KGLLNTAKPS TSTEIGNKDE DANHAVTNQK KQSRDSDVLL FQ

Arabidopsis Description

At4g25680 [Source:UniProtKB/TrEMBL;Acc:Q9SZZ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.