Factsheet for GSMUA_Achr11P21510_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P12230_001	Banana	cytosol	53.43	44.31
GSMUA_Achr11P...	Banana	cytosol	51.47	42.51
KRH08874	Soybean	cytosol	50.49	42.04
VIT_16s0050g01050.t01	Wine grape	cytosol	50.0	41.98
GSMUA_AchrUn_...	Banana	cytosol	49.51	40.73
KRH38387	Soybean	cytosol	49.02	40.32
KRH35244	Soybean	cytosol, peroxisome, plastid	42.16	35.83
PGSC0003DMT400018924	Potato	cytosol	36.76	35.38
Solyc02g082060.1.1	Tomato	cytosol	36.27	34.74
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	19.12	23.64
GSMUA_Achr3P04560_001	Banana	mitochondrion	25.98	23.35
GSMUA_Achr5P06500_001	Banana	cytosol, extracellular, peroxisome	24.02	22.79
GSMUA_Achr4P01900_001	Banana	mitochondrion	25.0	22.57
GSMUA_Achr4P30040_001	Banana	mitochondrion	24.02	21.88
GSMUA_Achr2P19400_001	Banana	plastid	23.04	21.66
GSMUA_AchrUn_...	Banana	cytosol	22.55	21.4
GSMUA_Achr7P25980_001	Banana	mitochondrion	21.57	21.15
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	22.06	19.57
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	23.04	18.22
GSMUA_Achr1P00440_001	Banana	mitochondrion	23.53	17.52
GSMUA_Achr11P...	Banana	mitochondrion	25.98	16.72
GSMUA_Achr5P12520_001	Banana	plastid	24.02	13.42

Protein Annotations

EnsemblPlants:GSMUA_Achr11P21510_001	EnsemblPlants:GSMUA_Achr11T21510_001	EnsemblPlantsGene:GSMUA_Achr11G21510_001	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378
PANTHER:PTHR12378:SF9	PFAM:PF05903	SMART:SM01179	UniParc:UPI0002968B49	UniProt:M0RU81	MapMan:19.4.1.7

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G21510_001]

Coordinates

chr11:-:22095764..22097759

Molecular Weight (calculated)

23087.1 Da

IEP (calculated)

8.823

GRAVY (calculated)

-0.570

Length

204 amino acids

Sequence
(BLAST)

001: MQAVVAHVYD VTNSPSAKTN NTVTRINCIF KDCIGLGGIF HSAIQVYGAH EWSFGYRERG SGVFHCSPGQ NQCYTYRQSI VLGETHCSQY EVNKILRELI
101: RAWTGDSYDP LAKNCNHFSD AFCEKLGVRK LPGNSSSLPW MGQSICQYRQ QCHGNHTKYS ISSEASKSRN WKCHQSGIKI YLWTSLKFSE ETKIAKQSES
201: RQPS

Best Arabidopsis Sequence Match ( AT4G25660.1 )
(BLAST)

001: MAEVVLHIYD VTNSGSEKTN NTIVQINRFF KDGIGLGGIF HSAIQVYGND EWSYGYCEQG TGVFSCPSGK NPMYTYREKI VLGKTDCTIF MVNQILRELS
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAH AGDTALEVAG NTAMRVKQAK TELVSASKVA YRFLSNVTSN ITNGSNGSSG SPQRPGTLNN
201: SDNGSFRLQG SWLKGILNTA KPSTSTEIGN KEEDTNHTIT NQKKQNRDSD VLLFQ

Arabidopsis Description

At4g25660 [Source:UniProtKB/TrEMBL;Acc:Q9SZZ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.