Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G205700.1 | Wheat | cytosol, peroxisome, plastid | 85.0 | 98.35 |
| HORVU1Hr1G049520.3 | Barley | cytosol, peroxisome, plastid | 83.93 | 96.71 |
| TraesCS1D01G192400.1 | Wheat | cytosol, peroxisome, plastid | 93.21 | 92.88 |
| Zm00001d029725_P001 | Maize | extracellular, mitochondrion | 77.5 | 88.57 |
| EER94588 | Sorghum | cytosol | 77.14 | 88.16 |
| Os10t0533900-01 | Rice | cytosol, nucleus, peroxisome | 73.57 | 83.74 |
| GSMUA_Achr11P... | Banana | cytosol | 63.57 | 72.06 |
| GSMUA_Achr8P12230_001 | Banana | cytosol | 63.21 | 71.95 |
| HORVU1Hr1G049510.1 | Barley | cytosol | 33.93 | 70.9 |
| KRH08874 | Soybean | cytosol | 58.57 | 66.94 |
| VIT_16s0050g01050.t01 | Wine grape | cytosol | 57.86 | 66.67 |
| KRH38387 | Soybean | cytosol | 57.14 | 64.52 |
| KRH35244 | Soybean | cytosol, peroxisome, plastid | 45.0 | 52.5 |
| PGSC0003DMT400018924 | Potato | cytosol | 34.64 | 45.75 |
| TraesCS7A01G019000.1 | Wheat | cytosol | 47.86 | 45.58 |
| Solyc02g082060.1.1 | Tomato | cytosol | 34.29 | 45.07 |
| TraesCS7A01G146100.1 | Wheat | plastid | 24.29 | 26.77 |
| TraesCS7A01G357600.1 | Wheat | cytosol | 19.64 | 26.7 |
| TraesCS5A01G543200.2 | Wheat | cytosol, peroxisome, vacuole | 21.79 | 26.29 |
| TraesCS6A01G243700.2 | Wheat | cytosol | 18.57 | 25.49 |
| TraesCS2A01G416700.1 | Wheat | cytosol | 18.57 | 24.88 |
| TraesCS4A01G040500.1 | Wheat | mitochondrion | 20.71 | 23.39 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G184300.1 | EnsemblPlantsGene:TraesCS1A01G184300 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF9 |
| PFAM:PF05903 | SEG:seg | SMART:SM01179 | MapMan:19.4.1.7 | : | : |
Description
No Description!
Coordinates
chr1A:-:334200852..334205193
Molecular Weight (calculated)
31029.6 Da
IEP (calculated)
7.442
GRAVY (calculated)
-0.390
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEVVLHVYD VTNSDSEKTN NTILQINRIF KDRIGLGGIF HSAVQVLHPA PPALPDPGDA FCLRAYPHLL QIPNSHFPMC RVQVYGEEEW SFGFCENGSG
101: VFSCPVSKNP MYTYRERIVL GETECTIATV NRILRELSRD WPGHSYDLLS RNCNHFCDVL CDRLGVPKLP GWVNRFANAG DTAVVVAENT AVKFRQAKTE
201: IVNASRVAYR FMAGLTSKNQ ASQESPGEQN RGSPTFQGTW FKNVVSAGAK PSTSGSTPSQ EADDAPPLQR QQSAEQPIRL
101: VFSCPVSKNP MYTYRERIVL GETECTIATV NRILRELSRD WPGHSYDLLS RNCNHFCDVL CDRLGVPKLP GWVNRFANAG DTAVVVAENT AVKFRQAKTE
201: IVNASRVAYR FMAGLTSKNQ ASQESPGEQN RGSPTFQGTW FKNVVSAGAK PSTSGSTPSQ EADDAPPLQR QQSAEQPIRL
001: MTEVVLHIYD VTNSGSEKTN NTIVQINRFF KDGIGLGGIF HSAIQVYGND EWSYGYCELG TGVFSCPSGK NPMYTYREKI VLGKTDCTIF MVNQMLRELS
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAN AGDTALEVAG NTAMRMKQAK TELVSASKVA YRFLSNVTSN VTNGSNGSPQ RPGTLNNSDS
201: GNLRLQGSWL KGLLNTAKPS TSTEIGNKDE DANHAVTNQK KQSRDSDVLL FQ
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAN AGDTALEVAG NTAMRMKQAK TELVSASKVA YRFLSNVTSN VTNGSNGSPQ RPGTLNNSDS
201: GNLRLQGSWL KGLLNTAKPS TSTEIGNKDE DANHAVTNQK KQSRDSDVLL FQ
Arabidopsis Description
At4g25680 [Source:UniProtKB/TrEMBL;Acc:Q9SZZ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.