Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029725_P001 | Maize | extracellular, mitochondrion | 93.47 | 93.47 |
| HORVU1Hr1G049520.3 | Barley | cytosol, peroxisome, plastid | 88.57 | 89.3 |
| TraesCS1B01G205700.1 | Wheat | cytosol, peroxisome, plastid | 87.76 | 88.84 |
| Os10t0533900-01 | Rice | cytosol, nucleus, peroxisome | 86.12 | 85.77 |
| TraesCS1A01G184300.1 | Wheat | cytosol | 88.16 | 77.14 |
| GSMUA_Achr11P... | Banana | cytosol | 75.1 | 74.49 |
| TraesCS1D01G192400.1 | Wheat | cytosol, peroxisome, plastid | 85.31 | 74.38 |
| GSMUA_Achr8P12230_001 | Banana | cytosol | 73.47 | 73.17 |
| KRH08874 | Soybean | cytosol | 67.76 | 67.76 |
| VIT_16s0050g01050.t01 | Wine grape | cytosol | 66.94 | 67.49 |
| KRH38387 | Soybean | cytosol | 66.94 | 66.13 |
| HORVU1Hr1G049510.1 | Barley | cytosol | 34.29 | 62.69 |
| KRH35244 | Soybean | cytosol, peroxisome, plastid | 51.84 | 52.92 |
| EER87703 | Sorghum | cytosol | 54.69 | 50.0 |
| PGSC0003DMT400018924 | Potato | cytosol | 39.18 | 45.28 |
| Solyc02g082060.1.1 | Tomato | cytosol | 39.18 | 45.07 |
| EER89945 | Sorghum | cytosol | 22.45 | 26.07 |
| EES11216 | Sorghum | cytosol | 22.04 | 25.96 |
| KXG19474 | Sorghum | plastid | 26.94 | 25.19 |
| EES07522 | Sorghum | cytosol | 20.41 | 23.92 |
| EER95706 | Sorghum | mitochondrion | 22.04 | 23.08 |
| EER95329 | Sorghum | mitochondrion | 22.86 | 22.22 |
| KXG39054 | Sorghum | plastid | 21.22 | 20.97 |
Protein Annotations
| EnsemblPlants:EER94588 | EnsemblPlantsGene:SORBI_3001G315500 | EntrezGene:8062875 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | PANTHER:PTHR12378 |
| PANTHER:PTHR12378:SF9 | PFAM:PF05903 | ProteinID:EER94588 | ProteinID:EER94588.1 | RefSeq:XP_002467590.1 | SEG:seg |
| SMART:SM01179 | unigene:Sbi.5684 | UniParc:UPI0001A8309A | UniProt:C5WUF8 | MapMan:19.4.1.7 | : |
Description
hypothetical protein
Coordinates
chr1:-:60378898..60381228
Molecular Weight (calculated)
26974.5 Da
IEP (calculated)
7.372
GRAVY (calculated)
-0.466
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEVVLHVYD VTNSDSEKTN NTILQINRIF KDRIGLGGIF HSAVQVYGEE EWSFGFCENG SGVFSCPVGK NPMYTYRERI VLGETECGIA AVNRILRELG
101: REWQGQSYDL LSRNCNHFCD VLCERLGVPK LPGWVNRFAN AGDTAVVVAE NTAVKFRQAK TEIVNASRVA YRFMAGLASK NQASPESPGN NQNRGSPTFQ
201: GAWFKNIISA GAKPSSSESA PSHSQDADDG TPLRRQSSTE QSTQL
101: REWQGQSYDL LSRNCNHFCD VLCERLGVPK LPGWVNRFAN AGDTAVVVAE NTAVKFRQAK TEIVNASRVA YRFMAGLASK NQASPESPGN NQNRGSPTFQ
201: GAWFKNIISA GAKPSSSESA PSHSQDADDG TPLRRQSSTE QSTQL
001: MTEVVLHIYD VTNSGSEKTN NTIVQINRFF KDGIGLGGIF HSAIQVYGND EWSYGYCELG TGVFSCPSGK NPMYTYREKI VLGKTDCTIF MVNQMLRELS
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAN AGDTALEVAG NTAMRMKQAK TELVSASKVA YRFLSNVTSN VTNGSNGSPQ RPGTLNNSDS
201: GNLRLQGSWL KGLLNTAKPS TSTEIGNKDE DANHAVTNQK KQSRDSDVLL FQ
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAN AGDTALEVAG NTAMRMKQAK TELVSASKVA YRFLSNVTSN VTNGSNGSPQ RPGTLNNSDS
201: GNLRLQGSWL KGLLNTAKPS TSTEIGNKDE DANHAVTNQK KQSRDSDVLL FQ
Arabidopsis Description
At4g25680 [Source:UniProtKB/TrEMBL;Acc:Q9SZZ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.