Factsheet for TraesCS2A01G416700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G124100.1
TraesCS1B01G143000.1
TraesCS1D01G130300.1
TraesCS2A01G255800.1
TraesCS2A01G346700.1
TraesCS2B01G365000.1
TraesCS2D01G266900.1
TraesCS2D01G345400.1
TraesCS3A01G104300.1
TraesCS3B01G122600.1
TraesCS3D01G106500.1
TraesCS7A01G019000.1
TraesCS7D01G016100.1
TraesCSU01G065800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17486.1	TraesCS2A01G346700.1	AT1G27300.1	21798944
AT4G17486.1	TraesCS2B01G365000.1	AT1G27300.1	21798944
AT4G17486.1	TraesCS2D01G345400.1	AT1G27300.1	21798944
AT4G17486.1	TraesCS2A01G255800.1	AT2G39760.1	21798944
AT4G17486.1	TraesCS2D01G266900.1	AT2G39760.1	21798944
AT4G17486.1	TraesCS7A01G019000.1	AT4G25660.1	21798944
AT4G17486.1	TraesCS7D01G016100.1	AT4G25660.1	21798944
AT4G17486.1	TraesCSU01G065800.1	AT4G25660.1	21798944
AT4G17486.1	TraesCS7A01G019000.1	AT4G25680.1	21798944
AT4G17486.1	TraesCS7D01G016100.1	AT4G25680.1	21798944
AT4G17486.1	TraesCSU01G065800.1	AT4G25680.1	21798944
AT5G47310.1	TraesCS1A01G124100.1	AT1G55190.1	21798944
AT5G47310.1	TraesCS1B01G143000.1	AT1G55190.1	21798944
AT5G47310.1	TraesCS1D01G130300.1	AT1G55190.1	21798944
AT5G47310.1	TraesCS3A01G104300.1	AT1G55190.1	21798944
AT5G47310.1	TraesCS3B01G122600.1	AT1G55190.1	21798944
AT5G47310.1	TraesCS3D01G106500.1	AT1G55190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G413700.1	Wheat	cytosol	99.52	97.65
TraesCS2B01G435700.2	Wheat	cytosol	97.13	97.6
EES11216	Sorghum	cytosol	77.03	77.4
Zm00001d026190_P001	Maize	cytosol	76.08	76.44
Zm00001d002758_P002	Maize	cytosol	75.12	75.12
Os04t0548000-01	Rice	cytosol	74.16	74.88
HORVU2Hr1G098080.1	Barley	peroxisome	91.87	73.56
TraesCS6A01G243700.2	Wheat	cytosol	63.64	65.2
GSMUA_AchrUn_...	Banana	cytosol	58.37	56.74
GSMUA_Achr4P30040_001	Banana	mitochondrion	59.81	55.8
PGSC0003DMT400067477	Potato	cytosol	54.07	51.13
KRH04183	Soybean	cytosol	54.55	51.12
Solyc08g078220.2.1	Tomato	cytosol	53.59	50.68
TraesCS7A01G357600.1	Wheat	cytosol	49.28	50.0
KRH57475	Soybean	cytosol	52.63	49.33
TraesCS5A01G543200.2	Wheat	cytosol, peroxisome, vacuole	54.55	49.14
KRH28159	Soybean	cytosol	52.63	49.11
KRH77327	Soybean	cytosol	52.63	49.11
CDX90471	Canola	cytosol	49.76	48.6
CDY09624	Canola	cytosol	49.76	48.37
Bra012661.1-P	Field mustard	cytosol	49.28	48.13
CDY27921	Canola	cytosol	50.72	47.75
AT4G17486.1	Thale cress	cytosol	50.72	47.32
CDY64684	Canola	cytosol	54.07	46.5
CDX77757	Canola	cytosol	54.07	46.5
Bra024951.1-P	Field mustard	cytosol	54.07	46.5
CDX76571	Canola	cytosol	50.24	46.46
AT5G47310.1	Thale cress	cytosol	53.59	45.71
GSMUA_Achr1P00440_001	Banana	mitochondrion	59.33	45.26
TraesCS4A01G040500.1	Wheat	mitochondrion	44.5	37.5
GSMUA_Achr5P12520_001	Banana	plastid	56.46	32.33
TraesCS7A01G146100.1	Wheat	plastid	34.93	28.74
TraesCS1A01G184300.1	Wheat	cytosol	24.88	18.57
TraesCS7A01G019000.1	Wheat	cytosol	25.84	18.37

Protein Annotations

EnsemblPlants:TraesCS2A01G416700.1	EnsemblPlantsGene:TraesCS2A01G416700	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF35
PFAM:PF05903	SEG:seg	SMART:SM01179	MapMan:19.4.1.7	:	:

Description

No Description!

Coordinates

chr2A:-:672841193..672843492

Molecular Weight (calculated)

22839.8 Da

IEP (calculated)

6.296

GRAVY (calculated)

-0.218

Length

209 amino acids

Sequence
(BLAST)

001: MAAQNGGGGG AAVVLNVYDL TPINDYLYWF GLGIFHSGIE VHGLEYAFGA HDLSTSGVFE VEPKRCPGYV YRRSVWMGTT EMSRAEFRSF IQTLAGKYNG
101: NTYHLISKNC NHFTDDVCKN ITKKPAPGWV NRLARVGYFF NRLLPKSIQV STVTHGATHP AFSDDDVDSS GSSLNGDSDM DDLDQHLLPA AGTDLQSIVV
201: SPKLSKDLV

Best Arabidopsis Sequence Match ( AT1G47740.2 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.