Factsheet for Os06t0182100-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G029950.1	Barley	plastid	74.81	79.67
TraesCS7D01G147600.1	Wheat	plastid	74.43	76.17
TraesCS7A01G146100.1	Wheat	plastid	73.66	75.98
TraesCS7B01G048600.1	Wheat	plastid	74.81	75.68
KXG19474	Sorghum	plastid	72.9	72.9
Zm00001d045118_P001	Maize	plastid	62.21	67.36
GSMUA_Achr4P01900_001	Banana	mitochondrion	40.08	46.46
KRH44526	Soybean	mitochondrion	38.17	46.08
KRH47381	Soybean	cytosol	37.79	45.21
GSMUA_Achr3P04560_001	Banana	mitochondrion	38.55	44.49
Solyc03g117100.2.1	Tomato	cytosol	36.64	42.67
PGSC0003DMT400036630	Potato	cytosol	36.26	42.6
VIT_09s0002g08960.t01	Wine grape	plasma membrane	36.64	41.92
AT1G80690.2	Thale cress	cytosol	35.5	40.26
CDY39951	Canola	cytosol	34.73	39.91
Bra003580.1-P	Field mustard	cytosol	33.97	39.04
CDX67961	Canola	cytosol	33.97	39.04
Bra035161.1-P	Field mustard	cytosol	33.97	39.04
CDX79359	Canola	cytosol	33.59	38.6
CDX87334	Canola	cytosol	33.97	38.36
Solyc06g068380.2.1	Tomato	cytosol	38.17	37.88
Os02t0655500-01	Rice	cytosol	29.01	37.25
Os03t0198500-01	Rice	mitochondrion	35.11	37.25
Os04t0548000-01	Rice	cytosol	28.63	36.23
GSMUA_Achr11P...	Banana	mitochondrion	41.22	34.07
Os03t0100900-01	Rice	plastid	31.3	33.47
Os06t0560400-01	Rice	cytosol	27.1	32.87
PGSC0003DMT400073331	Potato	nucleus	37.79	31.33
Os10t0533900-01	Rice	cytosol, nucleus, peroxisome	25.19	26.83
Os06t0107000-01	Rice	cytosol, nucleus	21.37	20.74

Protein Annotations

EnsemblPlants:Os06t0182100-00	EnsemblPlantsGene:Os06g0182100	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF17
PFAM:PF05903	ProteinID:BAS96477.1	SEG:seg	SMART:SM01179	UniParc:UPI0003939BA2	UniProt:A0A0P0WTV3
MapMan:19.4.1.7	:	:	:	:	:

Description

Hypothetical conserved gene. (Os06t0182100-00)

Coordinates

chr6:-:4062304..4063540

Molecular Weight (calculated)

27036.9 Da

IEP (calculated)

10.860

GRAVY (calculated)

-0.221

Length

262 amino acids

Sequence
(BLAST)

001: MAPFSSSSSP SPALAPASSS STASTPRAPR QQLPRGASSS SSSSPVYLNV YDVTPANGYA RWLGLGVYHS GVQVHGVEYA YGAHDGAGSG IFEVAPRRCP
101: GYAFREAILV GTTELTRAEV RAVMADLAAD FPGDAYNLVS RNCNHFCDAA CRRLVRARIP RWVNRLAKIG VVFTCVIPGN GAAVRRKGDP PATATAPGGK
201: ASIRSRSARQ GADAAAPPRP KTFFRSLSVG GGGGGGKNVT PRPLSTSPSP TPPAPPAFTT AT

Best Arabidopsis Sequence Match ( AT1G47740.2 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.