CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47381	Soybean	cytosol	90.78	89.95
VIT_09s0002g08960.t01	Wine grape	plasma membrane	72.35	68.56
CDY39951	Canola	cytosol	70.05	66.67
Bra035161.1-P	Field mustard	cytosol	69.59	66.23
AT1G80690.2	Thale cress	cytosol	69.59	65.37
Solyc03g117100.2.1	Tomato	cytosol	67.74	65.33
CDX87334	Canola	cytosol	69.59	65.09
PGSC0003DMT400036630	Potato	cytosol	66.82	65.02
Bra003580.1-P	Field mustard	cytosol	68.2	64.91
CDX67961	Canola	cytosol	68.2	64.91
CDX79359	Canola	cytosol	67.28	64.04
KRH15787	Soybean	mitochondrion	58.99	59.53
KRH05264	Soybean	cytosol, mitochondrion	58.99	59.26
KRH61696	Soybean	cytosol	56.68	56.68
KRH52364	Soybean	mitochondrion	57.6	55.8
GSMUA_Achr4P01900_001	Banana	mitochondrion	57.6	55.31
Solyc06g068380.2.1	Tomato	cytosol	64.52	53.03
GSMUA_Achr3P04560_001	Banana	mitochondrion	54.84	52.42
PGSC0003DMT400073331	Potato	nucleus	65.9	45.25
KRH38144	Soybean	mitochondrion	42.86	43.26
KRH28159	Soybean	cytosol	42.86	41.52
KRH77327	Soybean	cytosol	41.47	40.18
Zm00001d045118_P001	Maize	plastid	44.7	40.08
GSMUA_Achr11P...	Banana	mitochondrion	58.53	40.06
KRH15239	Soybean	mitochondrion	46.08	39.84
KRH05795	Soybean	mitochondrion	46.08	39.84
KRH57475	Soybean	cytosol	40.55	39.46
HORVU7Hr1G029950.1	Barley	plastid	44.7	39.43
TraesCS7D01G147600.1	Wheat	plastid	45.62	38.67
KRH04183	Soybean	cytosol	39.63	38.56
KXG19474	Sorghum	plastid	46.54	38.55
TraesCS7A01G146100.1	Wheat	plastid	44.7	38.19
Os06t0182100-00	Rice	plastid	46.08	38.17
KRH49521	Soybean	mitochondrion	43.78	37.85
KRG89196	Soybean	mitochondrion	43.78	37.85
TraesCS7B01G048600.1	Wheat	plastid	44.24	37.07
KRH03735	Soybean	nucleus	38.25	36.89
KRH63012	Soybean	nucleus	36.87	34.78
KRH54877	Soybean	cytosol, peroxisome	28.57	32.8
KRH35244	Soybean	cytosol, peroxisome, plastid	27.65	25.0
KRH08874	Soybean	cytosol	28.11	24.9
KRH38387	Soybean	cytosol	27.19	23.79

Protein Annotations

EMBL:ACUP02004936	EnsemblPlants:KRH44526	EnsemblPlantsGene:GLYMA_08G216800	EntrezGene:100796813	Gene3D:3.90.1720.30	InterPro:PPPDE_dom
MEROPS:C97.A04	PANTHER:PTHR12378	PANTHER:PTHR12378:SF17	PFAM:PF05903	ProteinID:KRH44526	ProteinID:KRH44526.1
SEG:seg	SMART:SM01179	UniParc:UPI0000E64A85	UniProt:I1KVJ5	MapMan:19.4.1.7	:

Description

hypothetical protein

Coordinates

chr8:-:17600394..17602581

Molecular Weight (calculated)

23978.7 Da

IEP (calculated)

9.133

GRAVY (calculated)

-0.393

Length

217 amino acids

Sequence
(BLAST)

001: MLCRRSSKNG VGSGSVPVHL NVYDLTPING YAYWFGLGVY HSGVQVHDVE FAFGAHEYPS TGIFEGEPKR CEGFAFRKTI LIGKTDMGPC EVRAVMEELA
101: AEYRGNAYNL ITKNCNHFCN DACLRLTGNP IPSWVNRLAR IGFMCNCVLP VTLNSTKVRH HKIEDKQCEE EKQALASEPK KLNSSNSSSP KGLRRGRSRT
201: RRALPPSSPL IIGSSSS

Best Arabidopsis Sequence Match ( AT1G80690.1 )
(BLAST)

001: MLCRKNSSLV DRGNVPVYLN VYDLTPINGY AYWLGLGVYH SGVEVHGIEY AYGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMEQLAD
101: NYKGSSYNLI TKNCNHFCDE TCIKLTGNPI PSWVNRLARI GFMCNCVLPA TINATRFGNN RVNQDKSCEA ENEKKKLTSV SSRERSTIAT PSSSSSSPSV
201: QVRGRSRKRR PRALQPSSPL TLGSSSV

Arabidopsis Description

F23A5.4 protein [Source:UniProtKB/TrEMBL;Acc:Q9SAI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.