CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g04860.t01	Wine grape	cytosol, nucleus, peroxisome	69.78	73.36
KRH63012	Soybean	nucleus	72.44	70.87
KRH54877	Soybean	cytosol, peroxisome	56.0	66.67
PGSC0003DMT400002750	Potato	cytosol	62.67	62.95
GSMUA_Achr5P06500_001	Banana	cytosol, extracellular, peroxisome	60.0	62.79
Solyc12g006880.1.1	Tomato	cytosol	62.22	62.5
GSMUA_Achr2P19400_001	Banana	plastid	57.33	59.45
TraesCS7B01G270200.1	Wheat	cytosol	52.89	57.77
TraesCS7A01G357600.1	Wheat	cytosol	52.89	57.77
TraesCS7D01G365100.1	Wheat	cytosol	52.44	57.28
Zm00001d046249_P001	Maize	cytosol	53.33	56.87
EER89945	Sorghum	cytosol	53.33	56.87
Os06t0560400-01	Rice	cytosol	53.78	56.02
KRH28159	Soybean	cytosol	53.78	54.02
KRH04183	Soybean	cytosol	52.44	52.91
KRH77327	Soybean	cytosol	52.44	52.68
KRH57475	Soybean	cytosol	50.67	51.12
KRH15787	Soybean	mitochondrion	42.67	44.65
KRH05264	Soybean	cytosol, mitochondrion	42.67	44.44
KRH38144	Soybean	mitochondrion	40.89	42.79
KRH05795	Soybean	mitochondrion	46.22	41.43
KRH15239	Soybean	mitochondrion	46.22	41.43
KRG89196	Soybean	mitochondrion	44.89	40.24
KRH61696	Soybean	cytosol	38.67	40.09
KRH49521	Soybean	mitochondrion	44.44	39.84
KRH52364	Soybean	mitochondrion	39.11	39.29
KRH44526	Soybean	mitochondrion	36.89	38.25
KRH47381	Soybean	cytosol	36.0	36.99
KRH35244	Soybean	cytosol, peroxisome, plastid	25.33	23.75
KRH08874	Soybean	cytosol	24.0	22.04
KRH38387	Soybean	cytosol	24.0	21.77

Protein Annotations

EMBL:ACUP02010358	EMBL:BT095739	EnsemblPlants:KRH03735	EnsemblPlantsGene:GLYMA_17G117700	EntrezGene:100778961	Gene3D:3.90.1720.30
InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF13	PFAM:PF05903	ProteinID:KRH03734.1	ProteinID:KRH03735
ProteinID:KRH03735.1	SMART:SM01179	UniParc:UPI0001B16816	UniProt:C6TDS4	MapMan:19.4.1.7	:

Description

hypothetical protein

Coordinates

chr17:+:9267658..9271041

Molecular Weight (calculated)

25599.8 Da

IEP (calculated)

4.785

GRAVY (calculated)

-0.525

Length

225 amino acids

Sequence
(BLAST)

001: MGVEENTPNS ISTSQCHEEQ SNNKINTHVL LNVYDLTPVN NYVYWFGFGI FHSGIEVHGK EYGFGAHDFP ASGVFEVEPR KCPGFIYRCS ISLGQTNMNP
101: SEFRTFIENM ASEYHGDTYH LITKNCNHFT DDLSYRLTGK QIPGWVNRLA KLGALCSCLL PESLQVTSVK QLPEYHECSE DEFVESLSPA TPRESTEIDE
201: EQEKHLLLPS DRTEDVHFVK ETQVK

Best Arabidopsis Sequence Match ( AT1G47740.1 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.