CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89196	Soybean	mitochondrion	97.21	97.21
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	74.9	75.5
PGSC0003DMT400064873	Potato	nucleus	74.5	75.1
GSMUA_Achr7P25980_001	Banana	mitochondrion	60.56	73.08
KRH05795	Soybean	mitochondrion	72.51	72.51
KRH15239	Soybean	mitochondrion	72.11	72.11
KRH38144	Soybean	mitochondrion	59.36	69.3
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	62.55	68.26
Zm00001d028130_P001	Maize	mitochondrion	66.14	66.4
CDY10616	Canola	cytosol, nucleus, peroxisome	65.74	65.74
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	66.93	65.12
EER95329	Sorghum	mitochondrion	65.34	65.08
TraesCS4A01G040500.1	Wheat	mitochondrion	64.14	64.92
Os03t0198500-01	Rice	mitochondrion	63.74	64.78
TraesCS4B01G261700.1	Wheat	mitochondrion	63.74	64.52
TraesCS4D01G261500.1	Wheat	mitochondrion	63.74	64.52
KXG39054	Sorghum	plastid	63.74	64.52
Zm00001d048173_P001	Maize	mitochondrion	64.94	64.43
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	40.24	61.21
AT1G47740.3	Thale cress	nucleus	67.33	60.57
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	61.35	59.23
Bra032229.1-P	Field mustard	nucleus	65.74	59.14
CDY17002	Canola	nucleus	66.14	59.07
CDY23657	Canola	nucleus	65.74	58.93
CDY25677	Canola	nucleus	62.95	58.74
Bra014091.1-P	Field mustard	nucleus	65.74	58.72
CDY17812	Canola	nucleus	65.34	58.36
VIT_03s0063g02130.t01	Wine grape	mitochondrion	77.69	58.21
KRH05264	Soybean	cytosol, mitochondrion	43.43	50.46
KRH15787	Soybean	mitochondrion	43.03	50.23
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	64.94	49.39
KRH61696	Soybean	cytosol	39.84	46.08
KRH52364	Soybean	mitochondrion	41.04	45.98
KRH03735	Soybean	nucleus	39.84	44.44
KRH77327	Soybean	cytosol	39.44	44.2
KRH28159	Soybean	cytosol	39.44	44.2
KRH63012	Soybean	nucleus	40.24	43.91
KRH44526	Soybean	mitochondrion	37.85	43.78
KRH57475	Soybean	cytosol	38.65	43.5
KRH04183	Soybean	cytosol	38.25	43.05
KRH47381	Soybean	cytosol	37.45	42.92
KRH54877	Soybean	cytosol, peroxisome	31.87	42.33
KRH35244	Soybean	cytosol, peroxisome, plastid	23.9	25.0
KRH08874	Soybean	cytosol	21.51	22.04
KRH38387	Soybean	cytosol	21.51	21.77

Protein Annotations

EMBL:ACUP02004392	EnsemblPlants:KRH49521	EnsemblPlantsGene:GLYMA_07G161000	EntrezGene:100802465	Gene3D:3.90.1720.30	InterPro:PPPDE_dom
MEROPS:C97.A09	PANTHER:PTHR12378	PANTHER:PTHR12378:SF4	PFAM:PF05903	ProteinID:KRH49521	ProteinID:KRH49521.1
SEG:seg	SMART:SM01179	UniParc:UPI00023391E9	UniProt:I1KKP0	MapMan:19.4.1.7	:

Description

hypothetical protein

Coordinates

chr7:+:20916975..20919766

Molecular Weight (calculated)

28561.3 Da

IEP (calculated)

8.943

GRAVY (calculated)

-0.392

Length

251 amino acids

Sequence
(BLAST)

001: MKSGFKNGWP SVVRLHLREK SVTPFCIFSK VKPAGNMPGN TPVYLNVYDL TTVNGYMYWA GIGIFHSGVE VYGVEYAFGA HDYPTSGVFE VEPRQCPGFK
101: FRKSIFMGTT NLDPFQIREF MERQSANYNG DTYHLIVKNC NHFCEDICYK LTGNSIPKWV NRLARIGSFC NCILPDALKT STVQHDDPNF QGCDSEKRRL
201: RTAFSCLSSI SMPQKEVSMS SLFMHSHYKG CLPPWELKKS KKGSLKQKLE D

Best Arabidopsis Sequence Match ( AT1G47740.1 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.