Factsheet for Solyc01g109430.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
plasma membrane 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064873	Potato	nucleus	98.8	98.8
KRG89196	Soybean	mitochondrion	75.9	75.3
KRH49521	Soybean	mitochondrion	75.5	74.9
GSMUA_Achr7P25980_001	Banana	mitochondrion	57.83	69.23
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	61.04	66.09
Solyc12g089060.1.1	Tomato	mitochondrion	65.46	65.99
Solyc04g080030.2.1	Tomato	mitochondrion	62.25	63.79
Zm00001d028130_P001	Maize	mitochondrion	63.86	63.6
EER95329	Sorghum	mitochondrion	63.05	62.3
CDY10616	Canola	cytosol, nucleus, peroxisome	62.25	61.75
TraesCS4B01G261700.1	Wheat	mitochondrion	61.45	61.69
Zm00001d048173_P001	Maize	mitochondrion	62.65	61.66
Os03t0198500-01	Rice	mitochondrion	61.04	61.54
TraesCS4D01G261500.1	Wheat	mitochondrion	61.04	61.29
TraesCS4A01G040500.1	Wheat	mitochondrion	60.64	60.89
KXG39054	Sorghum	plastid	60.64	60.89
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	61.85	59.69
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	39.36	59.39
AT1G47740.3	Thale cress	nucleus	63.86	56.99
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	59.44	56.92
VIT_03s0063g02130.t01	Wine grape	mitochondrion	75.5	56.12
Bra032229.1-P	Field mustard	nucleus	62.25	55.56
CDY23657	Canola	nucleus	62.25	55.36
CDY17002	Canola	nucleus	62.25	55.16
CDY25677	Canola	nucleus	59.44	55.02
CDY17812	Canola	nucleus	61.85	54.8
Bra014091.1-P	Field mustard	nucleus	61.85	54.8
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	62.25	46.97
Solyc08g078220.2.1	Tomato	cytosol	40.56	45.7
Solyc12g006880.1.1	Tomato	cytosol	39.36	43.75
Solyc03g117100.2.1	Tomato	cytosol	36.55	40.44
Solyc06g068380.2.1	Tomato	cytosol	36.14	34.09
Solyc03g008010.2.1	Tomato	cytosol	20.08	21.1
Solyc03g034310.1.1	Tomato	cytosol	7.23	20.93
Solyc02g082060.1.1	Tomato	cytosol	16.06	18.78

Protein Annotations

EnsemblPlants:Solyc01g109430.2.1	EnsemblPlantsGene:Solyc01g109430.2	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	MEROPS:C97.A09	PANTHER:PTHR12378
PANTHER:PTHR12378:SF4	PFAM:PF05903	SEG:seg	SMART:SM01179	UniParc:UPI00027689CC	UniProt:K4B3F6
MapMan:19.4.1.7	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:96384122..96386135

Molecular Weight (calculated)

28068.7 Da

IEP (calculated)

9.481

GRAVY (calculated)

-0.368

Length

249 amino acids

Sequence
(BLAST)

001: MKSKLKNGLC SVVPLHLQGE SATRFCMFPK VKSACCSPGN TPVYLNVYDL TPVNGYFYWA GIGVFHTGIQ VHGIEYAFGA HDYPTSGVFE LEPRQCPGFK
101: FRKSVFMGTT YLDPIQLREF IARQSANYNG DTYHLIAKNC NHFSDDICYR LTGKRIPKWV NRLARVGSLC NCILPEALKA STVQHGTNAQ NYDSEKRKLR
201: SSFNCLSSIS MRQGEKEVSI SSLFLHSHYK GCLPPWESKK SRSRSLKEG

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.