Factsheet for Solyc03g117100.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 3
cytosol 3
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036630	Potato	cytosol	98.67	99.55
VIT_09s0002g08960.t01	Wine grape	plasma membrane	71.56	70.31
KRH47381	Soybean	cytosol	67.56	69.41
KRH44526	Soybean	mitochondrion	65.33	67.74
CDY39951	Canola	cytosol	64.0	63.16
Bra035161.1-P	Field mustard	cytosol	63.56	62.72
CDX87334	Canola	cytosol	63.56	61.64
CDX79359	Canola	cytosol	62.22	61.4
AT1G80690.2	Thale cress	cytosol	62.67	61.04
Bra003580.1-P	Field mustard	cytosol	61.78	60.96
CDX67961	Canola	cytosol	61.78	60.96
Solyc06g068380.2.1	Tomato	cytosol	71.11	60.61
GSMUA_Achr3P04560_001	Banana	mitochondrion	49.78	49.34
GSMUA_Achr4P01900_001	Banana	mitochondrion	48.89	48.67
Solyc08g078220.2.1	Tomato	cytosol	41.33	42.08
Solyc12g089060.1.1	Tomato	mitochondrion	43.11	39.27
GSMUA_Achr11P...	Banana	mitochondrion	53.78	38.17
Os06t0182100-00	Rice	plastid	42.67	36.64
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	40.44	36.55
Solyc04g080030.2.1	Tomato	mitochondrion	39.11	36.21
HORVU7Hr1G029950.1	Barley	plastid	39.56	36.18
Zm00001d045118_P001	Maize	plastid	38.67	35.95
KXG19474	Sorghum	plastid	41.78	35.88
Solyc12g006880.1.1	Tomato	cytosol	35.56	35.71
TraesCS7D01G147600.1	Wheat	plastid	40.44	35.55
TraesCS7A01G146100.1	Wheat	plastid	40.0	35.43
TraesCS7B01G048600.1	Wheat	plastid	39.56	34.36
Solyc03g008010.2.1	Tomato	cytosol	26.67	25.32
Solyc03g034310.1.1	Tomato	cytosol	8.89	23.26
Solyc02g082060.1.1	Tomato	cytosol	21.78	23.0

Protein Annotations

EnsemblPlants:Solyc03g117100.2.1	EnsemblPlantsGene:Solyc03g117100.2	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	MEROPS:C97.A04	PANTHER:PTHR12378
PANTHER:PTHR12378:SF17	PFAM:PF05903	SEG:seg	SMART:SM01179	UniParc:UPI00027674D9	UniProt:K4BLL2
MapMan:19.4.1.7	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:66351126..66352900

Molecular Weight (calculated)

24605.2 Da

IEP (calculated)

9.098

GRAVY (calculated)

-0.346

Length

225 amino acids

Sequence
(BLAST)

001: MLCRKNSVSC GRGSVPVYLN VYDLTSINGY AYWLGLGVYH SGVQVHGVEY AFGAHEYSTT GIFEGEPKQC EGFTFRKAIL IGWTEMSHGE VKRVMEEFAE
101: KYRGNAYNLI TKNCNHFCND ACVKLSGNPI PSWVNRLARI GLFCNCIIPV SLNSTKIGHH RIEDKAGEGE KKKLRSRSSR LTPSSDSSSP SSSSSCSPPL
201: VTTSSNRSRG KSPVPSSSPL IANSI

Best Arabidopsis Sequence Match ( AT1G80690.1 )
(BLAST)

001: MLCRKNSSLV DRGNVPVYLN VYDLTPINGY AYWLGLGVYH SGVEVHGIEY AYGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMEQLAD
101: NYKGSSYNLI TKNCNHFCDE TCIKLTGNPI PSWVNRLARI GFMCNCVLPA TINATRFGNN RVNQDKSCEA ENEKKKLTSV SSRERSTIAT PSSSSSSPSV
201: QVRGRSRKRR PRALQPSSPL TLGSSSV

Arabidopsis Description

F23A5.4 protein [Source:UniProtKB/TrEMBL;Acc:Q9SAI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.