Factsheet for Solyc12g089060.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039949	Potato	mitochondrion	99.19	99.19
Solyc04g080030.2.1	Tomato	mitochondrion	78.95	80.25
VIT_18s0001g12090.t01	Wine grape	mitochondrion	78.54	78.54
KRH05795	Soybean	mitochondrion	77.33	76.1
KRH15239	Soybean	mitochondrion	76.92	75.7
CDY10616	Canola	cytosol, nucleus, peroxisome	70.85	69.72
KRH38144	Soybean	mitochondrion	59.92	68.84
Os03t0198500-01	Rice	mitochondrion	66.4	66.4
GSMUA_Achr7P25980_001	Banana	mitochondrion	55.87	66.35
Zm00001d028130_P001	Maize	mitochondrion	66.4	65.6
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	65.99	65.46
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	60.73	65.22
EER95329	Sorghum	mitochondrion	65.99	64.68
TraesCS4B01G261700.1	Wheat	mitochondrion	64.37	64.11
TraesCS4A01G040500.1	Wheat	mitochondrion	64.37	64.11
Zm00001d048173_P001	Maize	mitochondrion	65.59	64.03
TraesCS4D01G261500.1	Wheat	mitochondrion	63.97	63.71
AT1G47740.3	Thale cress	nucleus	71.66	63.44
CDY25677	Canola	nucleus	68.42	62.83
Bra032229.1-P	Field mustard	nucleus	70.85	62.72
CDY23657	Canola	nucleus	70.85	62.5
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	64.78	62.02
CDY17002	Canola	nucleus	70.04	61.57
Bra014091.1-P	Field mustard	nucleus	69.64	61.21
CDY17812	Canola	nucleus	69.23	60.85
KXG39054	Sorghum	plastid	60.32	60.08
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	38.87	58.18
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	59.92	56.92
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	65.18	48.79
Solyc08g078220.2.1	Tomato	cytosol	39.68	44.34
Solyc12g006880.1.1	Tomato	cytosol	39.68	43.75
Solyc03g117100.2.1	Tomato	cytosol	39.27	43.11
Solyc06g068380.2.1	Tomato	cytosol	39.68	37.12
Solyc03g034310.1.1	Tomato	cytosol	8.1	23.26
Solyc03g008010.2.1	Tomato	cytosol	22.27	23.21
Solyc02g082060.1.1	Tomato	cytosol	18.22	21.13

Protein Annotations

EnsemblPlants:Solyc12g089060.1.1	EnsemblPlantsGene:Solyc12g089060.1	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	MEROPS:C97.A09	PANTHER:PTHR12378
PANTHER:PTHR12378:SF11	PFAM:PF05903	SMART:SM01179	UniParc:UPI00027695CB	UniProt:K4DGX7	MapMan:19.4.1.7

Description

No Description!

Coordinates

chr12:-:64199344..64201300

Molecular Weight (calculated)

27893.4 Da

IEP (calculated)

9.879

GRAVY (calculated)

-0.450

Length

247 amino acids

Sequence
(BLAST)

001: MTTKPKKGWK SISSLNLKTK SAAHFCLLPK SKSDRYGPGD TPVYLNVYDL TPMNGYVYWV GLGIFHSGVE VHGVEYAFGA HDYSSSGVFE VEPRQCPGFK
101: FRKSIFIGVT KLDPCQVREF IERQAASYNG DTYHLISKNC NHFCNDTCYK LTGKKIPKWV NRLAKLGSSF NCMLPEALKV AAVEHDPNGP EYVTERRRLR
201: SAFSCLSSIS TRQRQLSTSS LFLQSPLKGC LPSWELRKSS NRSLKER

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.