Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g089060.1.1 | Tomato | mitochondrion | 99.19 | 99.19 |
| VIT_18s0001g12090.t01 | Wine grape | mitochondrion | 78.54 | 78.54 |
| KRH05795 | Soybean | mitochondrion | 76.92 | 75.7 |
| KRH15239 | Soybean | mitochondrion | 76.52 | 75.3 |
| PGSC0003DMT400071605 | Potato | mitochondrion | 82.19 | 71.23 |
| CDY10616 | Canola | cytosol, nucleus, peroxisome | 70.45 | 69.32 |
| KRH38144 | Soybean | mitochondrion | 59.51 | 68.37 |
| Os03t0198500-01 | Rice | mitochondrion | 66.8 | 66.8 |
| GSMUA_Achr7P25980_001 | Banana | mitochondrion | 55.87 | 66.35 |
| Zm00001d028130_P001 | Maize | mitochondrion | 66.8 | 66.0 |
| GSMUA_Achr4P07180_001 | Banana | cytosol, nucleus, peroxisome | 60.73 | 65.22 |
| EER95329 | Sorghum | mitochondrion | 66.4 | 65.08 |
| PGSC0003DMT400064873 | Potato | nucleus | 65.59 | 65.06 |
| TraesCS4B01G261700.1 | Wheat | mitochondrion | 64.78 | 64.52 |
| TraesCS4A01G040500.1 | Wheat | mitochondrion | 64.78 | 64.52 |
| Zm00001d048173_P001 | Maize | mitochondrion | 65.99 | 64.43 |
| TraesCS4D01G261500.1 | Wheat | mitochondrion | 64.37 | 64.11 |
| AT1G47740.3 | Thale cress | nucleus | 71.26 | 63.08 |
| CDY25677 | Canola | nucleus | 68.02 | 62.45 |
| Bra032229.1-P | Field mustard | nucleus | 70.45 | 62.37 |
| CDY23657 | Canola | nucleus | 70.45 | 62.14 |
| GSMUA_Achr1P22650_001 | Banana | mitochondrion, nucleus, plasma membrane | 64.78 | 62.02 |
| CDY17002 | Canola | nucleus | 69.64 | 61.21 |
| Bra014091.1-P | Field mustard | nucleus | 69.23 | 60.85 |
| CDY17812 | Canola | nucleus | 68.83 | 60.5 |
| KXG39054 | Sorghum | plastid | 60.32 | 60.08 |
| GSMUA_Achr4P14060_001 | Banana | cytosol, plastid, vacuole | 38.87 | 58.18 |
| Zm00001d048567_P002 | Maize | endoplasmic reticulum, plasma membrane | 59.92 | 56.92 |
| HORVU4Hr1G070620.3 | Barley | cytosol, nucleus, plastid | 65.59 | 49.09 |
| PGSC0003DMT400067477 | Potato | cytosol | 40.08 | 44.8 |
| PGSC0003DMT400002750 | Potato | cytosol | 40.49 | 44.64 |
| PGSC0003DMT400036630 | Potato | cytosol | 38.46 | 42.6 |
| PGSC0003DMT400073331 | Potato | nucleus | 39.68 | 31.01 |
| PGSC0003DMT400026255 | Potato | cytosol | 23.08 | 24.05 |
| PGSC0003DMT400018924 | Potato | cytosol | 18.22 | 21.23 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400039949 | EnsemblPlantsGene:PGSC0003DMG400015453 | EntrezGene:102597047 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | MEROPS:C97.A09 |
| PANTHER:PTHR12378 | PANTHER:PTHR12378:SF11 | PFAM:PF05903 | PGSC:PGSC0003DMG400015453 | RefSeq:XP_006342596.1 | RefSeq:XP_006342598.1 |
| RefSeq:XP_015162101.1 | SMART:SM01179 | UniParc:UPI0002949329 | UniProt:M1B912 | MapMan:19.4.1.7 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400015453]
Coordinates
chr12:-:56807818..56812540
Molecular Weight (calculated)
27907.5 Da
IEP (calculated)
9.879
GRAVY (calculated)
-0.452
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTKPKKGWK SISSLNLKTK SAAHFCLLPK SKSDRYGPGD TPVYLNVYDL TPMNGYVYWV GLGIFHSGVE VHGVEYAFGA HDYSSSGVFE VEPRQCPGFK
101: FRKSIFLGVT KLDPCQVREF IERQAASYNG DTYHLISKNC NHFCNDTCYK LTGKKIPKWV NRLAKLGSSF NCMLPEALKV AAVEHDPNGP EYITERRRLR
201: SAFSCLSSIS TRQRQLSTSS LFLQSPLKGC LPSWELRKSS NRSLKER
101: FRKSIFLGVT KLDPCQVREF IERQAASYNG DTYHLISKNC NHFCNDTCYK LTGKKIPKWV NRLAKLGSSF NCMLPEALKV AAVEHDPNGP EYITERRRLR
201: SAFSCLSSIS TRQRQLSTSS LFLQSPLKGC LPSWELRKSS NRSLKER
001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.