Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g066190.1.1 | Tomato | plasma membrane, plastid | 95.19 | 92.23 |
| Bra002833.1-P | Field mustard | plastid | 42.78 | 43.24 |
| CDY17405 | Canola | plastid | 43.85 | 42.71 |
| CDY32804 | Canola | plastid | 42.78 | 42.55 |
| AT5G56230.1 | Thale cress | plasma membrane, plastid | 42.25 | 42.47 |
| CDY51077 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 37.97 | 38.38 |
| Bra038009.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 37.97 | 38.17 |
| CDY50022 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 37.43 | 37.63 |
| AT1G55640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 35.83 | 35.83 |
| PGSC0003DMT400038994 | Potato | mitochondrion, plastid | 30.48 | 32.39 |
| PGSC0003DMT400006409 | Potato | plasma membrane | 31.02 | 31.87 |
| PGSC0003DMT400015659 | Potato | plasma membrane | 27.27 | 30.36 |
| PGSC0003DMT400041063 | Potato | plastid | 34.22 | 28.07 |
| PGSC0003DMT400034320 | Potato | plastid | 31.02 | 27.36 |
| PGSC0003DMT400050026 | Potato | plastid | 29.95 | 26.05 |
| PGSC0003DMT400061546 | Potato | plastid | 29.41 | 25.23 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400056954 | EnsemblPlantsGene:PGSC0003DMG400022145 | EntrezGene:102592213 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF11 | PFAM:PF03208 | PGSC:PGSC0003DMG400022145 | RefSeq:XP_006346073.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000296E66B | UniProt:M1C049 | MapMan:22.8.4.3.2 | : |
Description
Prenylated rab acceptor family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400022145]
Coordinates
chr7:-:56088630..56089623
Molecular Weight (calculated)
20033.6 Da
IEP (calculated)
5.049
GRAVY (calculated)
0.732
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSPPTSVTT IPIAGGDVIN RSVQNLYTFL SRSRPWPELI AGASAVDIPT SISDAAIRVR RNFKYFSVNY AILISACAAC SLIGTPILLI FACLIFASWL
101: IFLFFREDPM VVLGHQVSDL VVISGLATVS AIVVWYTGIL NSLMIGIMMG VLLSVIHGGL RNPEGLFVDE DDAVSTGLIS NAERGST
101: IFLFFREDPM VVLGHQVSDL VVISGLATVS AIVVWYTGIL NSLMIGIMMG VLLSVIHGGL RNPEGLFVDE DDAVSTGLIS NAERGST
001: MTPSPPPITY ISIPLPTNDV VSRSIHNLTT AISSHRPWSE LIFSGDFSLP ESFSSLLLRS KTNFNYFFVN YTIIVSTCAA FALITASPVA LIVVGAIIAL
101: WLIFHFFRED PLILWSFQVG DRTVLLFLVL ASVWAIWFTN SAVNLAVGVS VGLLLCIIHA VFRNSDELFL EEDDAINGGL IGSNLR
101: WLIFHFFRED PLILWSFQVG DRTVLLFLVL ASVWAIWFTN SAVNLAVGVS VGLLLCIIHA VFRNSDELFL EEDDAINGGL IGSNLR
Arabidopsis Description
PRA1G2PRA1 family protein G2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH16]
SUBAcon: [plasma membrane,plastid]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.