Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g066000.1.1 | Tomato | mitochondrion, plastid | 93.18 | 93.18 |
| VIT_07s0141g00630.t01 | Wine grape | plastid | 57.95 | 54.26 |
| KRH71325 | Soybean | plastid | 48.86 | 48.59 |
| KRH32112 | Soybean | plastid | 50.57 | 48.37 |
| KRH67312 | Soybean | plastid | 54.55 | 47.76 |
| KRG95630 | Soybean | plastid | 53.98 | 47.5 |
| PGSC0003DMT400006409 | Potato | plasma membrane | 46.59 | 45.05 |
| PGSC0003DMT400050026 | Potato | plastid | 50.57 | 41.4 |
| PGSC0003DMT400015659 | Potato | plasma membrane | 36.36 | 38.1 |
| KRH04803 | Soybean | plastid | 21.02 | 37.76 |
| PGSC0003DMT400061546 | Potato | plastid | 40.91 | 33.03 |
| PGSC0003DMT400056954 | Potato | plasma membrane | 32.39 | 30.48 |
| PGSC0003DMT400034320 | Potato | plastid | 36.36 | 30.19 |
| PGSC0003DMT400041063 | Potato | plastid | 37.5 | 28.95 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400038994 | EnsemblPlantsGene:PGSC0003DMG400015078 | EntrezGene:102585165 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF5 | PFAM:PF03208 | PGSC:PGSC0003DMG400015078 | RefSeq:XP_006351632.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000296979F | UniProt:M1B7N4 | MapMan:22.8.4.3.2 | : |
Description
Prenylated Rab acceptor protein [Source:PGSC_GENE;Acc:PGSC0003DMG400015078]
Coordinates
chr9:-:49114369..49115354
Molecular Weight (calculated)
20370.2 Da
IEP (calculated)
8.850
GRAVY (calculated)
0.660
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPSYDFSFS RARSGTLSFY ARRRPWRELL THPSSYTLPI SVSDFASRVK RNLSYFRVNY AMIVLVILFL SLLWHPISMI VFLIVSVAWF FLYFHRDEPL
101: MVFNRMIDDR IVLVVLGVVT VVSLMLTHVW LNVLVSIVVG IGLIFLHATF RITEDLFLEE DDAADGGLHS FVGTYV
101: MVFNRMIDDR IVLVVLGVVT VVSLMLTHVW LNVLVSIVVG IGLIFLHATF RITEDLFLEE DDAADGGLHS FVGTYV
001: MTNYGAIPTS SHPSPAIDLE YISRAKHRIK SGLATRRPWK SMFDFESMTL PHGFFDAISR IKTNLGYFRA NYAIGVLFIL FLSLLYHPTS LIVLSILVVF
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
Arabidopsis Description
PRA1F2PRA1 family protein F2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C889]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.