Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038994 | Potato | mitochondrion, plastid | 93.18 | 93.18 |
| VIT_07s0141g00630.t01 | Wine grape | plastid | 57.95 | 54.26 |
| KRH67312 | Soybean | plastid | 53.41 | 46.77 |
| KRH32112 | Soybean | plastid | 48.86 | 46.74 |
| KRH71325 | Soybean | plastid | 46.59 | 46.33 |
| KRG95630 | Soybean | plastid | 51.14 | 45.0 |
| Solyc03g121460.1.1 | Tomato | plastid | 46.02 | 44.51 |
| Solyc09g083320.1.1 | Tomato | plasma membrane | 36.93 | 38.69 |
| KRH04803 | Soybean | plastid | 19.89 | 35.71 |
| Solyc06g050570.1.1 | Tomato | plastid | 40.91 | 33.03 |
| Solyc01g097230.2.1 | Tomato | plastid | 27.84 | 30.43 |
| Solyc07g066190.1.1 | Tomato | plasma membrane, plastid | 31.82 | 29.02 |
| Solyc10g076360.1.1 | Tomato | plastid | 36.36 | 28.57 |
Protein Annotations
| EnsemblPlants:Solyc09g066000.1.1 | EnsemblPlantsGene:Solyc09g066000.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Prenylated_rab_accept_PRA1 |
| PANTHER:PTHR19317 | PANTHER:PTHR19317:SF5 | PFAM:PF03208 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000276CB43 |
| UniProt:K4CUM6 | MapMan:22.8.4.3.2 | : | : | : | : |
Description
PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:K4CUM6]
Coordinates
chr9:-:64265895..64266425
Molecular Weight (calculated)
20347.2 Da
IEP (calculated)
9.316
GRAVY (calculated)
0.674
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPSYDFSFS RARSGMLTVY ARRRPWRELL THPSSYTLPI SVSDFASRVK RNLSYFRVNY AMIVLVVLFL SILWHPISMI VFLIVSVGWY FLYFHRDEPL
101: MVFNRTIDDR IVLVVLGVVT VVSLVLTHVW LNVLVSIVVG IVLIFLHATF RITENLFLEE EDAADGGLHS FVGTYV
101: MVFNRTIDDR IVLVVLGVVT VVSLVLTHVW LNVLVSIVVG IVLIFLHATF RITENLFLEE EDAADGGLHS FVGTYV
001: MTNYGAIPTS SHPSPAIDLE YISRAKHRIK SGLATRRPWK SMFDFESMTL PHGFFDAISR IKTNLGYFRA NYAIGVLFIL FLSLLYHPTS LIVLSILVVF
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
Arabidopsis Description
PRA1F2PRA1 family protein F2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C889]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.