Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- vacuole 2
- plasma membrane 2
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67312 | Soybean | plastid | 87.0 | 86.57 |
| KRH04803 | Soybean | plastid | 38.5 | 78.57 |
| KRH32112 | Soybean | plastid | 57.5 | 62.5 |
| KRH71325 | Soybean | plastid | 54.5 | 61.58 |
| PGSC0003DMT400038994 | Potato | mitochondrion, plastid | 47.5 | 53.98 |
| VIT_07s0141g00630.t01 | Wine grape | plastid | 50.0 | 53.19 |
| Solyc09g066000.1.1 | Tomato | mitochondrion, plastid | 45.0 | 51.14 |
| KRH34097 | Soybean | plastid | 46.5 | 48.95 |
| KRG92690 | Soybean | plastid | 46.0 | 47.92 |
| KRH47141 | Soybean | plasma membrane | 39.5 | 44.38 |
| KRH44167 | Soybean | plasma membrane | 38.5 | 43.75 |
| KRH10001 | Soybean | mitochondrion | 40.0 | 43.48 |
| KRH23330 | Soybean | plastid | 39.5 | 42.93 |
| KRH76033 | Soybean | endoplasmic reticulum | 39.0 | 35.62 |
| KRH14895 | Soybean | plastid | 38.0 | 35.35 |
| KRH73238 | Soybean | plastid | 37.5 | 34.88 |
| KRH65569 | Soybean | plastid | 39.5 | 34.8 |
| KRG93818 | Soybean | extracellular, plasma membrane, vacuole | 14.5 | 34.52 |
| KRH34380 | Soybean | cytosol, plastid | 28.0 | 33.14 |
| KRH74153 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 32.5 | 32.5 |
| KRH54835 | Soybean | endoplasmic reticulum, extracellular, vacuole | 17.5 | 32.41 |
| KRH49060 | Soybean | plasma membrane | 32.0 | 32.32 |
| KRH49465 | Soybean | plastid | 34.5 | 30.94 |
| KRH00333 | Soybean | plastid | 33.5 | 29.52 |
| KRH32827 | Soybean | plastid | 32.5 | 28.76 |
Protein Annotations
| EntrezGene:100794255 | MapMan:22.8.4.3.2 | EMBL:ACUP02012122 | EnsemblPlantsGene:GLYMA_19G161800 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | UniProt:I1N9N4 | EnsemblPlants:KRG95630 | ProteinID:KRG95630 |
| ProteinID:KRG95630.1 | PFAM:PF03208 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF13 | InterPro:Prenylated_rab_accept_PRA1 | TMHMM:TMhelix |
| UniParc:UPI000233F2C2 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:42248611..42249213
Molecular Weight (calculated)
22007.5 Da
IEP (calculated)
8.777
GRAVY (calculated)
0.497
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSASSPAPH YSSLPSPSSS NSTNYFLTRA ATSTRSSFAT RRPWEEVFAL YSFTRPYSIG EATMRVRRNL DNFRVNYFMM VLFVLFLSLL WHPVSIIVYL
101: VALVAWFFLY FFRDEPVVVF GNVVDDRVVA AVLAAATVLG LVLSGVWVNV VGSGIVGVGV VVLHAAFRST EDLYVDEHDG GLLSFVGGTP TKRTGGYTLI
101: VALVAWFFLY FFRDEPVVVF GNVVDDRVVA AVLAAATVLG LVLSGVWVNV VGSGIVGVGV VVLHAAFRST EDLYVDEHDG GLLSFVGGTP TKRTGGYTLI
001: MTNYGAIPTS SHPSPAIDLE YISRAKHRIK SGLATRRPWK SMFDFESMTL PHGFFDAISR IKTNLGYFRA NYAIGVLFIL FLSLLYHPTS LIVLSILVVF
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
Arabidopsis Description
PRA1F2PRA1 family protein F2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C889]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.