Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002833.1-P | Field mustard | plastid | 75.27 | 75.68 |
| CDY32804 | Canola | plastid | 74.19 | 73.4 |
| CDY17405 | Canola | plastid | 74.73 | 72.4 |
| PGSC0003DMT400056954 | Potato | plasma membrane | 42.47 | 42.25 |
| Solyc07g066190.1.1 | Tomato | plasma membrane, plastid | 42.47 | 40.93 |
| AT1G55640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 38.71 | 38.5 |
| AT3G13720.1 | Thale cress | cytosol, plasma membrane, plastid | 32.26 | 31.91 |
| AT1G55190.1 | Thale cress | plasma membrane | 31.18 | 30.69 |
| AT4G00005.1 | Thale cress | extracellular, plasma membrane | 19.35 | 30.51 |
| AT3G13710.1 | Thale cress | plasma membrane | 30.65 | 30.32 |
| AT3G56110.1 | Thale cress | plastid | 32.26 | 28.71 |
| AT2G40380.1 | Thale cress | plastid | 31.72 | 27.7 |
| AT4G29658.2 | Thale cress | plastid | 27.96 | 27.37 |
| AT5G07110.1 | Thale cress | plastid | 31.72 | 27.31 |
| AT1G08770.1 | Thale cress | plastid | 30.65 | 27.27 |
| AT1G17700.1 | Thale cress | plasma membrane | 25.81 | 26.67 |
| AT5G01640.1 | Thale cress | plastid | 31.72 | 26.46 |
| AT2G38360.1 | Thale cress | plastid | 29.57 | 25.0 |
| AT1G04260.1 | Thale cress | plasma membrane | 23.12 | 23.63 |
| AT5G05380.2 | Thale cress | plasma membrane | 29.03 | 19.01 |
Protein Annotations
| MapMan:22.8.4.3.2 | EntrezGene:835722 | UniProt:A0A178UHN0 | ProteinID:AED96737.1 | ArrayExpress:AT5G56230 | EnsemblPlantsGene:AT5G56230 |
| RefSeq:AT5G56230 | TAIR:AT5G56230 | RefSeq:AT5G56230-TAIR-G | EnsemblPlants:AT5G56230.1 | TAIR:AT5G56230.1 | ProteinID:BAB09114.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | RefSeq:NP_200434.1 |
| ProteinID:OAO92602.1 | PFAM:PF03208 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | Symbol:PRA1.G2 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF11 | InterPro:Prenylated_rab_accept_PRA1 |
| UniProt:Q9FH16 | TMHMM:TMhelix | UniParc:UPI000009E6BE | SEG:seg | : | : |
Description
PRA1G2PRA1 family protein G2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH16]
Coordinates
chr5:-:22758544..22759556
Molecular Weight (calculated)
20533.0 Da
IEP (calculated)
5.037
GRAVY (calculated)
0.739
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPSPPPITY ISIPLPTNDV VSRSIHNLTT AISSHRPWSE LIFSGDFSLP ESFSSLLLRS KTNFNYFFVN YTIIVSTCAA FALITASPVA LIVVGAIIAL
101: WLIFHFFRED PLILWSFQVG DRTVLLFLVL ASVWAIWFTN SAVNLAVGVS VGLLLCIIHA VFRNSDELFL EEDDAINGGL IGSNLR
101: WLIFHFFRED PLILWSFQVG DRTVLLFLVL ASVWAIWFTN SAVNLAVGVS VGLLLCIIHA VFRNSDELFL EEDDAINGGL IGSNLR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.