Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G01640.1 | Thale cress | plastid | 82.2 | 43.5 |
| KRG93818 | Soybean | extracellular, plasma membrane, vacuole | 27.97 | 39.29 |
| CDX80758 | Canola | plastid | 70.34 | 38.78 |
| Os01t0827400-01 | Rice | extracellular, mitochondrion, plasma membrane | 40.68 | 33.1 |
| Solyc10g076360.1.1 | Tomato | plastid | 57.63 | 30.36 |
| AT2G40380.1 | Thale cress | plastid | 54.24 | 30.05 |
| PGSC0003DMT400041063 | Potato | plastid | 57.63 | 29.82 |
| PGSC0003DMT400034320 | Potato | plastid | 53.39 | 29.72 |
| AT2G38360.1 | Thale cress | plastid | 55.08 | 29.55 |
| GSMUA_Achr5P14320_001 | Banana | plastid | 46.61 | 29.41 |
| GSMUA_Achr7P22310_001 | Banana | plastid | 46.61 | 29.26 |
| AT3G56110.1 | Thale cress | plastid | 51.69 | 29.19 |
| GSMUA_Achr10P... | Banana | plastid | 44.92 | 29.12 |
| KRH76033 | Soybean | endoplasmic reticulum | 52.54 | 28.31 |
| GSMUA_Achr5P07440_001 | Banana | plastid | 50.85 | 27.91 |
| AT5G07110.1 | Thale cress | plastid | 50.85 | 27.78 |
| Os12t0107600-00 | Rice | plastid | 50.85 | 27.27 |
| KXG38626 | Sorghum | golgi, plasma membrane, plastid | 42.37 | 27.03 |
| KRH65569 | Soybean | plastid | 51.69 | 26.87 |
| GSMUA_Achr4P18690_001 | Banana | plastid | 50.0 | 26.7 |
| GSMUA_Achr3P10010_001 | Banana | plastid | 48.31 | 26.39 |
| Os11t0107600-01 | Rice | plastid | 49.15 | 26.36 |
| TraesCS4B01G137300.1 | Wheat | plastid | 48.31 | 25.11 |
| TraesCS4D01G132000.1 | Wheat | plastid | 48.31 | 25.11 |
| TraesCS4A01G180500.1 | Wheat | plastid | 48.31 | 25.0 |
| Zm00001d010603_P002 | Maize | mitochondrion | 45.76 | 24.88 |
| HORVU4Hr1G024530.1 | Barley | plastid | 47.46 | 24.78 |
| Os05t0474400-01 | Rice | plasma membrane, vacuole | 45.76 | 24.55 |
| KXG22202 | Sorghum | plastid | 44.92 | 24.42 |
| TraesCS5A01G151600.1 | Wheat | plastid | 45.76 | 23.89 |
| TraesCS5D01G156800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 45.76 | 23.89 |
| KRH49465 | Soybean | plastid | 44.92 | 23.77 |
| KRH00333 | Soybean | plastid | 44.92 | 23.35 |
| OQU82692 | Sorghum | plastid | 44.07 | 23.21 |
| TraesCS1B01G307400.1 | Wheat | golgi, unclear | 43.22 | 23.18 |
| TraesCS1D01G293300.1 | Wheat | plastid | 43.22 | 23.08 |
| TraesCS1A01G297900.1 | Wheat | plastid | 43.22 | 23.08 |
| TraesCS5B01G150200.1 | Wheat | plastid | 44.07 | 23.01 |
| KRH32827 | Soybean | plastid | 44.07 | 23.01 |
| TraesCS3B01G380000.1 | Wheat | plastid | 41.53 | 23.0 |
| HORVU1Hr1G070360.1 | Barley | plastid | 43.22 | 22.97 |
| TraesCS3A01G348100.1 | Wheat | plastid | 40.68 | 22.64 |
| EES15518 | Sorghum | plastid | 44.07 | 22.32 |
| HORVU5Hr1G047520.1 | Barley | endoplasmic reticulum, plastid | 45.76 | 22.31 |
| TraesCS3D01G341700.1 | Wheat | plastid | 41.53 | 22.17 |
| HORVU3Hr1G088130.1 | Barley | plastid | 40.68 | 21.82 |
| HORVU2Hr1G086930.1 | Barley | cytosol, plastid | 20.34 | 21.43 |
| Zm00001d043018_P001 | Maize | mitochondrion | 39.83 | 21.36 |
| AT3G13710.1 | Thale cress | plasma membrane | 33.9 | 21.28 |
| AT5G05380.2 | Thale cress | plasma membrane | 50.85 | 21.13 |
| EES03822 | Sorghum | plastid | 39.83 | 21.08 |
| AT1G17700.1 | Thale cress | plasma membrane | 29.66 | 19.44 |
| AT5G56230.1 | Thale cress | plasma membrane, plastid | 30.51 | 19.35 |
| AT1G55640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 30.51 | 19.25 |
| AT3G13720.1 | Thale cress | cytosol, plasma membrane, plastid | 30.51 | 19.15 |
| AT1G55190.1 | Thale cress | plasma membrane | 30.51 | 19.05 |
| OQU79263 | Sorghum | plastid | 25.42 | 18.18 |
| Zm00001d052322_P001 | Maize | plastid | 28.81 | 17.99 |
| AT1G08770.1 | Thale cress | plastid | 27.97 | 15.79 |
| AT4G29658.2 | Thale cress | plastid | 23.73 | 14.74 |
| AT1G04260.1 | Thale cress | plasma membrane | 21.19 | 13.74 |
Protein Annotations
| ArrayExpress:AT4G00005 | EnsemblPlants:AT4G00005.1 | EnsemblPlantsGene:AT4G00005 | EntrezGene:6241005 | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF34 | PFAM:PF03208 |
| ProteinID:AEE81812.1 | RefSeq:AT4G00005 | RefSeq:AT4G00005-TAIR-G | RefSeq:NP_001154191.1 | SEG:seg | TAIR:AT4G00005 |
| TAIR:AT4G00005.1 | TMHMM:TMhelix | UniParc:UPI0001A7B3D3 | UniProt:F4JGU4 | MapMan:22.8.4.3.2 | : |
Description
PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:F4JGU4]
Coordinates
chr4:-:1180..1536
Molecular Weight (calculated)
13315.6 Da
IEP (calculated)
5.718
GRAVY (calculated)
1.076
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRFWKNSSY FRVNYVCIIA LIISFSLPAH PFSLILLLCL AASWLFLYLF RPSDRPLILI GRSFSEYETL GGLILSTIAV IFFTSVGSVL ISALMIGITT
101: IPPLVDEFFV LVEDSITW
101: IPPLVDEFFV LVEDSITW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.