Factsheet for Bra038009.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50022	Canola	cytosol, endoplasmic reticulum, plasma membrane	98.92	98.92
AT1G55640.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	67.2	66.84
Bra002833.1-P	Field mustard	plastid	41.4	41.62
PGSC0003DMT400056954	Potato	plasma membrane	38.17	37.97
Solyc07g066190.1.1	Tomato	plasma membrane, plastid	39.25	37.82
Bra037983.1-P	Field mustard	extracellular, plasma membrane	27.42	36.43
Bra011125.1-P	Field mustard	mitochondrion	30.11	32.0
Bra014355.1-P	Field mustard	cytosol, plasma membrane, plastid	32.26	31.75
Bra027406.1-P	Field mustard	plasma membrane	30.11	30.94
Bra021504.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	30.11	30.77
Bra017037.1-P	Field mustard	plastid	13.44	29.07
Bra030561.1-P	Field mustard	plasma membrane	27.42	28.65
Bra025954.1-P	Field mustard	plasma membrane	27.96	28.26
Bra007796.1-P	Field mustard	plastid	12.9	27.91
Bra031001.1-P	Field mustard	plasma membrane	26.88	27.62
Bra007216.1-P	Field mustard	plastid	29.57	27.09
Bra004965.1-P	Field mustard	plastid	30.65	26.76
Bra000056.1-P	Field mustard	plastid	31.72	26.58
Bra005112.1-P	Field mustard	plastid	23.66	26.19
Bra005924.1-P	Field mustard	plastid	30.65	26.15
Bra003228.1-P	Field mustard	plastid	29.57	26.07
Bra009110.1-P	Field mustard	plastid	29.57	25.58
Bra018602.1-P	Field mustard	plastid	26.88	24.04
Bra021502.1-P	Field mustard	plastid	25.81	22.43
Bra021503.1-P	Field mustard	plastid	21.51	19.23

Protein Annotations

EnsemblPlants:Bra038009.1	EnsemblPlants:Bra038009.1-P	EnsemblPlantsGene:Bra038009	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016192	InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF11	PFAM:PF03208	SEG:seg
TMHMM:TMhelix	UniParc:UPI000253EE2A	UniProt:M4FA95	MapMan:22.8.4.3.2	:	:

Description

AT1G55640 (E=3e-057) PRA1.G1 | PRA1.G1 (PRENYLATED RAB ACCEPTOR 1.G1)

Coordinates

chrA06:-:141417..141977

Molecular Weight (calculated)

20837.6 Da

IEP (calculated)

6.499

GRAVY (calculated)

0.735

Length

186 amino acids

Sequence
(BLAST)

001: MLPPENILPI TAEERHHSFG EVISLSVQNL IAFVSSQRPW LEFLALGSMD LPTSFSSAVS RSKVNLRHFV VNYSLITAAS ITLFLVSNPT ALVTLATFAI
101: LWLLLCFCRD HPLVLYGRQV SDKVIFFGLI VGSFWGLWLT HCFFSLVLGV LTGVLLCLVH AVLRNPDDLF VQEEEVVVPS HFLHWS

Best Arabidopsis Sequence Match ( AT1G55640.1 )
(BLAST)

001: MLAPGESVLI PAEEISLSAG DVISLSVHNL IASVSSYRPW WSEFLAFGSI DRPSSFSPAV SRVKLNLHHF AVNYVLLTAA SITLFLIGDP MALVTVASFV
101: AMWLLLYFYR DHPLVLYGRH ISDRVIVFGL ILGSLWALWF INSLQCLILG VVTSVLLCLV HAIIRNSDDL FVQEKDVVVP SNFLHWS

Arabidopsis Description

PRA1G1PRA1 family protein G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWD1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.