Factsheet for Bra025954.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26225	Canola	plasma membrane	98.37	98.37
Bra031001.1-P	Field mustard	plasma membrane	83.7	85.08
AT1G17700.1	Thale cress	plasma membrane	77.72	79.44
PGSC0003DMT400006409	Potato	plasma membrane	49.46	50.0
KRH47141	Soybean	plasma membrane	48.37	50.0
KRH44167	Soybean	plasma membrane	46.74	48.86
KRH10001	Soybean	mitochondrion	48.37	48.37
Solyc03g121460.1.1	Tomato	plastid	47.28	47.8
KRH23330	Soybean	plastid	47.28	47.28
VIT_09s0002g02400.t01	Wine grape	plastid	49.46	47.15
Bra037983.1-P	Field mustard	extracellular, plasma membrane	35.33	46.43
Bra027406.1-P	Field mustard	plasma membrane	44.02	44.75
GSMUA_Achr7P09070_001	Banana	plastid	44.57	43.62
Bra014355.1-P	Field mustard	cytosol, plasma membrane, plastid	44.02	42.86
Bra021504.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	42.39	42.86
Os05t0200280-01	Rice	plasma membrane	41.85	39.9
TraesCS1B01G143000.1	Wheat	plastid	40.76	39.06
TraesCS1D01G130300.1	Wheat	plastid	40.22	38.74
TraesCS1A01G124100.1	Wheat	plastid	39.67	38.22
Zm00001d039455_P002	Maize	extracellular, mitochondrion	39.67	37.82
EES00126	Sorghum	plastid	39.13	37.5
TraesCS3D01G106500.1	Wheat	plastid	38.04	36.84
TraesCS3B01G122600.1	Wheat	plastid	38.04	36.84
TraesCS3A01G104300.1	Wheat	plastid	37.5	36.13
Os01t0196500-01	Rice	plastid	38.59	35.32
OQU77594	Sorghum	plastid	36.96	34.69
Zm00001d037747_P001	Maize	plastid	35.33	34.57
HORVU1Hr1G028520.1	Barley	plastid	39.67	33.8
Bra030561.1-P	Field mustard	plasma membrane	31.52	32.58
Bra011125.1-P	Field mustard	mitochondrion	28.8	30.29
Bra004965.1-P	Field mustard	plastid	34.78	30.05
Bra018602.1-P	Field mustard	plastid	32.61	28.85
Bra009110.1-P	Field mustard	plastid	33.7	28.84
Bra005112.1-P	Field mustard	plastid	26.09	28.57
Bra003228.1-P	Field mustard	plastid	32.07	27.96
Bra038009.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	28.26	27.96
HORVU3Hr1G018940.2	Barley	plastid	38.59	27.84
Bra007216.1-P	Field mustard	plastid	30.43	27.59
Bra002833.1-P	Field mustard	plastid	27.72	27.57
Bra000056.1-P	Field mustard	plastid	32.61	27.03
Bra021502.1-P	Field mustard	plastid	30.98	26.64
Bra017037.1-P	Field mustard	plastid	11.96	25.58
Bra021503.1-P	Field mustard	plastid	28.8	25.48
Bra007796.1-P	Field mustard	plastid	11.41	24.42
Bra005924.1-P	Field mustard	plastid	27.72	23.39

Protein Annotations

EnsemblPlants:Bra025954.1	EnsemblPlants:Bra025954.1-P	EnsemblPlantsGene:Bra025954	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF2	PFAM:PF03208	SEG:seg	TMHMM:TMhelix
UniParc:UPI000253F368	UniProt:M4EAZ5	MapMan:22.8.4.3.2	:	:	:

Description

AT1G17700 (E=6e-060) PRA1.F1 | PRA1.F1 (PRENYLATED RAB ACCEPTOR 1.F1)

Coordinates

chrA06:+:6778737..6779291

Molecular Weight (calculated)

20997.0 Da

IEP (calculated)

9.966

GRAVY (calculated)

0.446

Length

184 amino acids

Sequence
(BLAST)

001: MTTIYGTNPT AANDLAPKLE YITRTNNQHH VRPGLATRRP WKQMLDLRSF HFPRKIASVI TRIKTNVVYF QTNYTIVVLF SVFLSLIWKP FALLILLALI
101: GAWLFLYFLR DEPLTVFDRE IDHRVVLIVM SVLTLSVLFL TDAKLNIAVA VVVGVVVVLL HAAVRKTEEI NQNEDETSPL LPQV

Best Arabidopsis Sequence Match ( AT1G17700.1 )
(BLAST)

001: MTTYGTNQKS SNDLAPKLEY ITRGINQHKR SGLATRRPWK QMLDLGSFNF PRKLATVITR IRANTVYFQT NYTIVVLFSV FLSLIWNPFS LLVLLALLGA
101: WLFLYFLRDE PLTVFDREID HRIVLIIMSV ITLSILFLTD AKLNIAVAIV AGALAVLSHA AVRKTEDLFQ TDEETSLLNP

Arabidopsis Description

PRA1F1PRA1 family protein F1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.