Factsheet for Bra011125.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
extracellular 2
plasma membrane 3
nucleus 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43514	Canola	mitochondrion	97.71	97.71
AT4G29658.2	Thale cress	plastid	80.0	73.68
VIT_11s0016g02330.t01	Wine grape	plastid	44.0	40.74
Bra037983.1-P	Field mustard	extracellular, plasma membrane	30.29	37.86
KRH49060	Soybean	plasma membrane	39.43	34.85
GSMUA_Achr7P09070_001	Banana	plastid	37.14	34.57
Zm00001d039455_P002	Maize	extracellular, mitochondrion	37.71	34.2
KRH74153	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	38.29	33.5
EES00126	Sorghum	plastid	35.43	32.29
Bra027406.1-P	Field mustard	plasma membrane	33.14	32.04
Zm00001d037747_P001	Maize	plastid	33.14	30.85
Bra021504.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	32.0	30.77
Bra014355.1-P	Field mustard	cytosol, plasma membrane, plastid	33.14	30.69
TraesCS3D01G106500.1	Wheat	plastid	33.14	30.53
TraesCS3B01G122600.1	Wheat	plastid	33.14	30.53
Bra038009.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	32.0	30.11
TraesCS3A01G104300.1	Wheat	plastid	32.57	29.84
OQU77594	Sorghum	plastid	33.14	29.59
Bra025954.1-P	Field mustard	plasma membrane	30.29	28.8
Bra031001.1-P	Field mustard	plasma membrane	29.71	28.73
Os05t0200280-01	Rice	plasma membrane	31.43	28.5
TraesCS1D01G130300.1	Wheat	plastid	30.86	28.27
Os01t0196500-01	Rice	plastid	32.0	27.86
TraesCS1A01G124100.1	Wheat	plastid	30.29	27.75
TraesCS1B01G143000.1	Wheat	plastid	30.29	27.6
Bra030561.1-P	Field mustard	plasma membrane	28.0	27.53
Bra009110.1-P	Field mustard	plastid	33.14	26.98
Bra017037.1-P	Field mustard	plastid	13.14	26.74
Bra007216.1-P	Field mustard	plastid	30.86	26.6
Bra004965.1-P	Field mustard	plastid	32.0	26.29
Bra018602.1-P	Field mustard	plastid	30.86	25.96
Bra007796.1-P	Field mustard	plastid	12.57	25.58
Bra003228.1-P	Field mustard	plastid	30.29	25.12
Bra002833.1-P	Field mustard	plastid	26.29	24.86
HORVU1Hr1G028520.1	Barley	plastid	30.29	24.54
HORVU3Hr1G018940.2	Barley	plastid	34.86	23.92
Bra021503.1-P	Field mustard	plastid	26.86	22.6
Bra005924.1-P	Field mustard	plastid	28.0	22.48
Bra000056.1-P	Field mustard	plastid	28.0	22.07
Bra021502.1-P	Field mustard	plastid	25.71	21.03
Bra005112.1-P	Field mustard	plastid	20.0	20.83

Protein Annotations

EnsemblPlants:Bra011125.1	EnsemblPlants:Bra011125.1-P	EnsemblPlantsGene:Bra011125	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016192	InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF2	PFAM:PF03208	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002545527	UniProt:M4D3S1	MapMan:22.8.4.3.2	:	:

Description

AT4G29658 (E=1e-029) PRA1.C | PRA1.C (PRENYLATED RAB ACCEPTOR 1.C)

Coordinates

chrA01:+:3783505..3784032

Molecular Weight (calculated)

19245.0 Da

IEP (calculated)

6.510

GRAVY (calculated)

0.906

Length

175 amino acids

Sequence
(BLAST)

001: MLGRAKGLIS LGLSSRRPWL ELVQWSSLSL PTSFTVATER IKTNIMIFRT NYLVIFFVAI FISMLWQPVH LSVFVVLIIA WLYVYSRDNE PLVIFGSVID
101: DSALVLTLLV LTLCIILLTN VTGGILLGVL AGLPVVLVHG ICRNTESLFV LEDDEEKVAT MSVASSSLSS SSLTK

Best Arabidopsis Sequence Match ( AT4G29658.2 )
(BLAST)

001: MTTYGTIPSQ ENASSSLSLL GRAKELISLG LSSQRPWLEL VQCSAFSLPI SFSVATERIK SNIMIFRTNY IVIFIVSIFI SMLWQPVHLS VFVILIVAWL
101: YVYSRDNEPW VIFGSVIDDS TLVLVLLVLT IGIFLLTDVS RGIVIGVLAG LPVVLVHGMC RRNTEMLFVL EDDEEKVAMN TSSSSLSSSS

Arabidopsis Description

PRA1.CPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B7W4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.