CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87703
EES12950
KXG30456

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53180.1	EES12950	AT1G14340.1	21798944
AT3G53180.1	KXG30456	AT2G31955.1	21798944
AT3G53180.1	EER87703	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031055_P001	Maize	cytosol	18.05	94.41
Zm00001d032815_P011	Maize	cytosol	93.71	93.71
Zm00001d047936_P001	Maize	cytosol	19.6	92.18
Zm00001d044569_P001	Maize	cytosol	19.6	92.18
Zm00001d033947_P001	Maize	cytosol	12.0	90.18
TraesCS1A01G143000.1	Wheat	cytosol	82.66	82.76
TraesCS1D01G141800.1	Wheat	golgi	82.54	82.54
TraesCS1B01G158600.1	Wheat	cytosol	82.3	82.3
HORVU1Hr1G038060.9	Barley	cytosol	82.19	81.99
Os10t0456500-02	Rice	plasma membrane	82.07	81.78
TraesCS6D01G065600.1	Wheat	cytosol	72.45	74.85
HORVU6Hr1G012290.5	Barley	cytosol	72.92	72.84
GSMUA_AchrUn_...	Banana	cytosol	25.65	67.5
GSMUA_AchrUn_...	Banana	cytosol	40.62	66.15
VIT_08s0007g04670.t01	Wine grape	cytosol	63.9	64.05
PGSC0003DMT400072665	Potato	cytosol	26.72	63.74
Solyc01g056400.1.1	Tomato	endoplasmic reticulum, extracellular	4.99	63.64
Solyc10g083830.1.1	Tomato	extracellular	46.2	63.46
Zm00001d021367_P001	Maize	cytosol	15.56	63.28
KRH32570	Soybean	cytosol, nucleus	61.76	62.2
Bra006975.1-P	Field mustard	cytosol	61.52	61.16
CDX78151	Canola	cytosol	61.52	61.16
CDX73575	Canola	cytosol	58.91	60.49
CDY13313	Canola	cytosol	58.67	60.39
Bra028548.1-P	Field mustard	cytosol	58.31	60.1
AT3G53180.1	Thale cress	cytosol	60.81	60.09
CDX67559	Canola	cytosol	59.03	59.74
KRH32567	Soybean	endoplasmic reticulum	27.79	54.29
Solyc10g083550.1.1	Tomato	cytosol	24.82	52.38
PGSC0003DMT400024814	Potato	cytosol	18.41	51.49
PGSC0003DMT400048935	Potato	cytosol	15.08	47.21
PGSC0003DMT400072398	Potato	cytosol	25.89	46.48
PGSC0003DMT400072666	Potato	cytosol	46.32	46.04
Solyc10g083850.1.1	Tomato	cytosol	45.49	45.98
Solyc06g011330.1.1	Tomato	cytosol	16.15	45.64
KRH75546	Soybean	plastid	12.11	44.35
Solyc01g056430.1.1	Tomato	cytosol	17.1	43.64
PGSC0003DMT400024816	Potato	cytosol	16.51	43.44
Solyc01g056390.1.1	Tomato	cytosol, nucleus	5.58	43.12
Solyc10g083840.1.1	Tomato	cytosol	8.19	42.86
Solyc01g056450.1.1	Tomato	cytosol	12.35	42.62
Solyc06g011290.1.1	Tomato	cytosol	18.53	40.0
PGSC0003DMT400048929	Potato	cytosol, plastid	7.84	38.37
PGSC0003DMT400048927	Potato	cytosol	6.29	34.64

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	Gene3D:3.10.20.70	Gene3D:3.20.20.140
Gene3D:3.30.590.10	MapMan:35.2	InterPro:Amidohydro-rel	UniProt:C5WZG6	EnsemblPlants:EER91525	ProteinID:EER91525
ProteinID:EER91525.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0006542	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	InterPro:Gln_synt_N
InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_cat_dom	InterPro:IPR036651	InterPro:Metal_Hydrolase	PFAM:PF00120	PFAM:PF04909
PANTHER:PTHR43785	PANTHER:PTHR43785:SF2	MetaCyc:PWY-381	MetaCyc:PWY-5675	MetaCyc:PWY-6549	MetaCyc:PWY-6963
MetaCyc:PWY-6964	SMART:SM01230	EnsemblPlantsGene:SORBI_3001G231000	SUPFAM:SSF51556	SUPFAM:SSF54368	SUPFAM:SSF55931
UniParc:UPI00081ADF14	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:22289486..22298552

Molecular Weight (calculated)

93302.4 Da

IEP (calculated)

6.268

GRAVY (calculated)

-0.131

Length

842 amino acids

Sequence
(BLAST)

001: MEARYEALRR ATEEVAAVDA HAHNLVEHGS AFPFLRCFSE AEGDALALAP HSLSFKRSLR DIAALYNCEP VLEKVEKFRS AEGLRSVASK CFQAANISAI
101: LIDDGIAFDK MLDSESHKAF APVVGRVLRI ERLAEIIIND ESFSGSSWTL DSFTESYIAK LNSVSNQIVA LKSIAAYRSG LEINPNVSKT DAEDGLRKEL
201: TGPRPFRITN KNLIDYLFTC SLGIAVSLNL PVQIHTGFGD KDLDLRKCNP LHLRAVLEDE RFAKCQIVLL HASYPFSKEA SYLASVYSQV YLDFGLAIPK
301: LSVHGMTSSL KELLELAPIK KVMFSTDGYA FPETYYLGAK RARDVVYRVL SAACEDGDLS IQEAIEAVED IFRRNALHLY KLNVDNGSIN HETTIVGDSV
401: SLSSVEEDVL FVRIIWSDAS GQYRCRVVPA RRFYEITRNK GVGLTFAAMG MTSFCDGPAD GSNLTGVGEI RLVPDMPTLV RIPWSRREEM VMADMQIRPG
501: EGWEYCPRNA LRKVTKVLLD EFNVTMKAGF ENEFFLRRKL VSDGVEQWVP YDNTNYCSTS AFDGASSILQ EVYSSLKASG IVVEQLHAEA GKGQFEIALK
601: YILCTLAADK LIYARETIKS IARKHGLLAT FLPKPDLNDL GSGSHVHLSL WENDQNVFMG SSKDNFHGMS KTGAQFLAGV YHHLPSILAF TAPHPNSYDR
701: IQPDTWSGAY QCWGKENREA PLRTACPPGV PLDLVSNFEI KSFDGCANPH LGLAAIVAAG IDGLRRDLKL PEPIESNPSD HASKLKRLPQ NLQESVESLS
801: ADKVFHELIG DKLVTAAIAI RKAEIDHFAK NPGAFNDLIY RY

Best Arabidopsis Sequence Match ( AT3G53180.1 )
(BLAST)

001: MEFSELKEAI EKIELVDAHA HNIVSLDSSF PFIGTFSEAA GDALTFAPHS LSFKRNLREI AQLYGTEVSL EAVEEHRKTS GLDSFTSKCF KEARISALLI
101: DDGLKLDKKH DIEWHRNFVP FVGRVLRIET LAEQILEEEC PGGYFYGSES TEPPVWDLDS FTKTFVERLN SLVPEIVALK TIAAYRSGLD IDTYVSKEVA
201: ENGLVEVLRA GKPVRIGNKG LIDYILTISL EVAVRRDLPL QIHTGFGDKD LDLRLSNPLH LRTLLEDKRF GKCRIVLLHA AYPFSKEASF LSSVYPQVYL
301: DFGLAVPKLS VHGMVSSVKE LLDLASIKKV MFSTDGYASP ETYYLGAKKA REVIFLVLSD ACASGDLSLM EAIDAAKDIF SRNSIGFYKL NIDTDSSSPQ
401: NIISPKLKIK EPDVQEDSSS FVRIIWVDTS GQQRCRAVQA QRFNRSVKKN GVGLTFASMG MTSFTDGPAE ESKLTGVGEI RLVPDLSTKQ TIPWTKQESM
501: VLADMQLKPG EAWGYCPRET LRRVAKVLKD EFDLVMNAGF ENEFYLLKNV VREGKEEYMP FDFGPYCATS SFDAASPIFH DIVPALESLN IEVEQFHAES
601: GKGQFEVSLG HTIASHAADN LVYTREVIRS VARKQGLLAT FVPKYDYCDI GSGSHVHLSL WKNGENVFPA SNNSSSHGIS SVGEEFMAGV LFHLPSILAI
701: IAPLPNSYDR IQPNTWSGAF QCWGKENREA ALRAASPPGT PDGLVTNFEI KSFDGSANPH LGLAVIMAAG IDGLRRHLQL PTPIDINPAD VAATLNRLPE
801: TLSEAVEALD KDKVLHDLLG QKLLVAIKGV RKAEVEYYSK NPDAYKQLIH RY

Arabidopsis Description

Nodulin/glutamine synthase-like protein [Source:UniProtKB/TrEMBL;Acc:F4J9A0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.