Factsheet for Zm00001d021367_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002122_P007
Zm00001d016866_P001
Zm00001d026425_P003
Zm00001d045580_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53180.1	Zm00001d002122_P007	AT1G14340.1	21798944
AT3G53180.1	Zm00001d026425_P003	AT1G14340.1	21798944
AT3G53180.1	Zm00001d016866_P001	AT2G31955.1	21798944
AT3G53180.1	Zm00001d045580_P001	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031055_P001	Maize	cytosol	49.76	63.98
Zm00001d047936_P001	Maize	cytosol	55.07	63.69
Zm00001d044569_P001	Maize	cytosol	55.07	63.69
Zm00001d033947_P001	Maize	cytosol	25.12	46.43
PGSC0003DMT400072665	Potato	cytosol	46.38	27.2
PGSC0003DMT400048927	Potato	cytosol	19.81	26.8
Solyc01g056450.1.1	Tomato	cytosol	26.09	22.13
Solyc10g083550.1.1	Tomato	cytosol	40.1	20.8
GSMUA_AchrUn_...	Banana	cytosol	49.28	19.73
Solyc06g011330.1.1	Tomato	cytosol	28.02	19.46
PGSC0003DMT400024816	Potato	cytosol	28.02	18.12
PGSC0003DMT400072398	Potato	cytosol	40.58	17.91
Solyc10g083830.1.1	Tomato	extracellular	48.31	16.31
Zm00001d032815_P011	Maize	cytosol	65.22	16.03
EER91525	Sorghum	cytosol	63.28	15.56
TraesCS1A01G143000.1	Wheat	cytosol	58.94	14.51
TraesCS1D01G141800.1	Wheat	golgi	58.94	14.49
TraesCS1B01G158600.1	Wheat	cytosol	58.94	14.49
TraesCS6D01G065600.1	Wheat	cytosol	57.0	14.48
HORVU1Hr1G038060.9	Barley	cytosol	57.97	14.22
Os10t0456500-02	Rice	plasma membrane	57.97	14.2
HORVU6Hr1G012290.5	Barley	cytosol	55.07	13.52
VIT_08s0007g04670.t01	Wine grape	cytosol	52.66	12.98
KRH32570	Soybean	cytosol, nucleus	49.28	12.2
CDX73575	Canola	cytosol	47.34	11.95
CDX78151	Canola	cytosol	47.83	11.69
Bra006975.1-P	Field mustard	cytosol	47.83	11.69
PGSC0003DMT400048929	Potato	cytosol, plastid	9.66	11.63
AT3G53180.1	Thale cress	cytosol	47.83	11.62
Bra028548.1-P	Field mustard	cytosol	45.41	11.51
CDY13313	Canola	cytosol	45.41	11.49
CDX67559	Canola	cytosol	44.93	11.18
Solyc10g083850.1.1	Tomato	cytosol	38.65	9.6
PGSC0003DMT400072666	Potato	cytosol	39.13	9.56
Solyc10g083840.1.1	Tomato	cytosol	2.42	3.11
GSMUA_AchrUn_...	Banana	cytosol	3.38	2.19
Solyc01g056390.1.1	Tomato	cytosol, nucleus	0.97	1.83
Solyc01g056430.1.1	Tomato	cytosol	2.42	1.52
PGSC0003DMT400048935	Potato	cytosol	1.93	1.49
PGSC0003DMT400024814	Potato	cytosol	1.93	1.33
KRH32567	Soybean	endoplasmic reticulum	2.42	1.16
KRH75546	Soybean	plastid	0.97	0.87
Solyc06g011290.1.1	Tomato	cytosol	0.0	0.0
Solyc01g056400.1.1	Tomato	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	Gene3D:3.30.590.10	MapMan:35.2
UniProt:A0A1D6IAH5	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0006807	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0010508	GO:GO:0016874	InterPro:Gln_synth/guanido_kin_cat_dom
InterPro:Gln_synth_cat_dom	ProteinID:ONM56974.1	ProteinID:ONM56975.1	PFAM:PF00120	PFAM:PF10186	PANTHER:PTHR43785
PANTHER:PTHR43785:SF2	SMART:SM01230	SUPFAM:SSF55931	UniParc:UPI000220959F	InterPro:UV_resistance/autophagy_Atg14	EnsemblPlantsGene:Zm00001d021367
EnsemblPlants:Zm00001d021367_P001	EnsemblPlants:Zm00001d021367_T001	:	:	:	:

Description

glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases

Coordinates

chr7:-:150060843..150064672

Molecular Weight (calculated)

22954.9 Da

IEP (calculated)

9.943

GRAVY (calculated)

-0.339

Length

207 amino acids

Sequence
(BLAST)

001: MELRNRLTEL KRKTAVDKTE VEQASSDLKA KTVPLNLALV TLKKRRADAV AMHTNAMKVA QMNLMATTSD CMKMQSKSVK QLCRLFPMRR NDQNVFMGSS
101: KDNFHGMSKT GEQFLAGVYH HLPSILAFTA PHPNSYDRIQ PDTWSGAYLC WGKENKEAPL RTACPPGVPL DLVSNFEIKS FDGCANPHLG LAAIVAAGID
201: GLRRHLT

Best Arabidopsis Sequence Match ( AT3G53180.1 )
(BLAST)

001: MEFSELKEAI EKIELVDAHA HNIVSLDSSF PFIGTFSEAA GDALTFAPHS LSFKRNLREI AQLYGTEVSL EAVEEHRKTS GLDSFTSKCF KEARISALLI
101: DDGLKLDKKH DIEWHRNFVP FVGRVLRIET LAEQILEEEC PGGYFYGSES TEPPVWDLDS FTKTFVERLN SLVPEIVALK TIAAYRSGLD IDTYVSKEVA
201: ENGLVEVLRA GKPVRIGNKG LIDYILTISL EVAVRRDLPL QIHTGFGDKD LDLRLSNPLH LRTLLEDKRF GKCRIVLLHA AYPFSKEASF LSSVYPQVYL
301: DFGLAVPKLS VHGMVSSVKE LLDLASIKKV MFSTDGYASP ETYYLGAKKA REVIFLVLSD ACASGDLSLM EAIDAAKDIF SRNSIGFYKL NIDTDSSSPQ
401: NIISPKLKIK EPDVQEDSSS FVRIIWVDTS GQQRCRAVQA QRFNRSVKKN GVGLTFASMG MTSFTDGPAE ESKLTGVGEI RLVPDLSTKQ TIPWTKQESM
501: VLADMQLKPG EAWGYCPRET LRRVAKVLKD EFDLVMNAGF ENEFYLLKNV VREGKEEYMP FDFGPYCATS SFDAASPIFH DIVPALESLN IEVEQFHAES
601: GKGQFEVSLG HTIASHAADN LVYTREVIRS VARKQGLLAT FVPKYDYCDI GSGSHVHLSL WKNGENVFPA SNNSSSHGIS SVGEEFMAGV LFHLPSILAI
701: IAPLPNSYDR IQPNTWSGAF QCWGKENREA ALRAASPPGT PDGLVTNFEI KSFDGSANPH LGLAVIMAAG IDGLRRHLQL PTPIDINPAD VAATLNRLPE
801: TLSEAVEALD KDKVLHDLLG QKLLVAIKGV RKAEVEYYSK NPDAYKQLIH RY

Arabidopsis Description

Nodulin/glutamine synthase-like protein [Source:UniProtKB/TrEMBL;Acc:F4J9A0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.