Factsheet for Zm00001d016866_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002611_P002
Zm00001d026069_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31955.1	Zm00001d002611_P002	AT1G12520.1	21798944
AT2G31955.1	Zm00001d026069_P001	AT1G12520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30456	Sorghum	mitochondrion	94.83	97.72
Os12t0507000-01	Rice	mitochondrion	80.05	81.45
Os02t0258900-01	Rice	mitochondrion	77.83	80.2
PGSC0003DMT400074537	Potato	cytosol	67.49	78.96
CDX79447	Canola	mitochondrion	67.73	73.73
Bra022872.1-P	Field mustard	mitochondrion	67.49	73.46
CDX84751	Canola	mitochondrion	67.49	73.46
GSMUA_Achr1P19680_001	Banana	mitochondrion	73.4	73.22
AT2G31955.1	Thale cress	cytosol	67.49	70.26
Solyc01g073730.2.1	Tomato	nucleus	68.23	69.77
TraesCS5A01G059400.1	Wheat	mitochondrion	79.31	68.8
KRH13856	Soybean	mitochondrion	67.73	68.75
KRH43566	Soybean	cytosol, mitochondrion, plastid	67.49	68.5
TraesCS5B01G066700.1	Wheat	mitochondrion	78.82	68.38
TraesCS5D01G070900.1	Wheat	mitochondrion	78.33	67.23
HORVU5Hr1G014920.3	Barley	mitochondrion	72.17	61.17
VIT_13s0156g00170.t01	Wine grape	cytosol	68.72	55.8
CDY42083	Canola	extracellular, mitochondrion	14.04	39.58

Protein Annotations

KEGG:00790+4.1.99.22	EntrezGene:100272516	Gene3D:3.20.20.70	MapMan:7.1.1.1	UniProt:A0A1D6HAY1	ProteinID:AQK71862.1
InterPro:Aldolase_TIM	InterPro:Elp3/MiaB/NifB	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006777	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019008	GO:GO:0019538	GO:GO:0046872
GO:GO:0051536	GO:GO:0051539	InterPro:IPR013785	HAMAP:MF_01225_B	InterPro:Main_SPASM_domain-containing	InterPro:MoaA
InterPro:MoaA_NifB_PqqE_Fe-S-bd_CS	InterPro:Mob_synth_C	PFAM:PF04055	PFAM:PF06463	PFAM:PF13353	ScanProsite:PS01305
PANTHER:PTHR22960	PANTHER:PTHR22960:SF0	SMART:SM00729	InterPro:SPASM/twitch_domain-containing	SUPFAM:SSF102114	TIGRFAMs:TIGR02666
UniParc:UPI000845237A	EnsemblPlantsGene:Zm00001d016866	EnsemblPlants:Zm00001d016866_P001	EnsemblPlants:Zm00001d016866_T001	InterPro:rSAM	SEG:seg

Description

Cyclic pyranopterin monophosphate synthase mitochondrial

Coordinates

chr5:-:178641592..178646428

Molecular Weight (calculated)

45419.6 Da

IEP (calculated)

8.793

GRAVY (calculated)

-0.139

Length

406 amino acids

Sequence
(BLAST)

001: MMRRCVSALA RRRRPDRTVD TMKARFQCLV NISSSIRDTD SQRCSSTCAT SCATDPDVLS RETSSSEMLV DSFGRFHNYL RISLTERCNL RCQYCMPAEG
101: VELTPKSELL SHDEIIRIAD LFVTSGVNKI RLIGGEPTVR KDIEDICLHL SSLKGLKTLA MTTNGIVLSK KLPKLKECGL NALNISLDTL VPAKFEFMTR
201: RKGHSKVLES IDAAVELGYS PVKVNCVIMR GINDDEICNF VELTRHKPIN VRFIEFMPFD GNVWNVKKLV PYAEMLDKVR QSYKGVERLQ DHPTDTAKNF
301: RIDGHVGTIS FITSMTEHFC AGCNRLRLLA DGNLKVCLFG PSELLFDLPM HLAVIEVSLR EPIRTGVDDA GLKEIIGAAV KRKKAKHAGM FDIAKTANRP
401: MIHIGG

Best Arabidopsis Sequence Match ( AT2G31955.1 )
(BLAST)

001: MRRCFSKITD CHLGFKNSNF LLVGSEVGSG SVTRTITTTT SERLFSSSYA AHQVDQIKDN PVSDMLIDKF GRLHTYLRIS LTERCNLRCQ YCMPSEGVEL
101: TPKPQLLSQS EIVRLAGLFV SAGVNKIRLT GGEPTVRKDI EEICLQLSSL KGLKNLAITT NGITLAKKLP RLKECGLDSL NISLDTLVPA KFEFLTRRKG
201: HDRVMKSIDT AIELGYNPVK VNCVIMRGLN DDEICDFVEL TRDKPINVRF IEFMPFDGNV WNVKKLVPYA EVMDKVVKRF PSIKRMQDHP TETAKNFTID
301: GHCGSVSFIT SMTEHFCAGC NRLRLLADGN FKVCLFGPSE VSLRDPLRSG ADDEALREII GAAVKRKKAA HAGMLDIAKT ANRPMIHIGG

Arabidopsis Description

CNX2CNX2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.