Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84751 | Canola | mitochondrion | 83.85 | 87.67 |
| Bra022872.1-P | Field mustard | mitochondrion | 83.85 | 87.67 |
| CDX79447 | Canola | mitochondrion | 82.82 | 86.6 |
| PGSC0003DMT400074537 | Potato | cytosol | 72.05 | 80.98 |
| KRH13856 | Soybean | mitochondrion | 74.87 | 73.0 |
| KRH43566 | Soybean | cytosol, mitochondrion, plastid | 74.36 | 72.5 |
| Solyc01g073730.2.1 | Tomato | nucleus | 72.56 | 71.28 |
| Os02t0258900-01 | Rice | mitochondrion | 70.77 | 70.05 |
| KXG30456 | Sorghum | mitochondrion | 70.26 | 69.54 |
| Os12t0507000-01 | Rice | mitochondrion | 70.51 | 68.92 |
| GSMUA_Achr1P19680_001 | Banana | mitochondrion | 70.77 | 67.81 |
| Zm00001d016866_P001 | Maize | mitochondrion | 70.26 | 67.49 |
| VIT_13s0156g00170.t01 | Wine grape | cytosol | 78.21 | 61.0 |
| TraesCS5B01G066700.1 | Wheat | mitochondrion | 70.0 | 58.33 |
| TraesCS5A01G059400.1 | Wheat | mitochondrion | 69.74 | 58.12 |
| TraesCS5D01G070900.1 | Wheat | mitochondrion | 69.74 | 57.51 |
| HORVU5Hr1G014920.3 | Barley | mitochondrion | 64.36 | 52.4 |
Protein Annotations
| KEGG:00790+4.1.99.22 | Gene3D:3.20.20.70 | MapMan:7.1.1.1 | EntrezGene:817754 | UniProt:A0A178W0P6 | ProteinID:AAM15155.1 |
| ProteinID:AAM15276.1 | ProteinID:AEC08608.1 | ProteinID:AEC08609.1 | ProteinID:AEC08610.1 | ProteinID:ANM62583.1 | ArrayExpress:AT2G31955 |
| EnsemblPlantsGene:AT2G31955 | RefSeq:AT2G31955 | TAIR:AT2G31955 | RefSeq:AT2G31955-TAIR-G | EnsemblPlants:AT2G31955.1 | TAIR:AT2G31955.1 |
| EMBL:AY065265 | EMBL:AY087242 | EMBL:AY096557 | InterPro:Aldolase_TIM | Unigene:At.19645 | Symbol:CNX2 |
| InterPro:Elp3/MiaB/NifB | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 |
| GO:GO:0006777 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016829 | GO:GO:0019008 | GO:GO:0019538 | GO:GO:0046872 | GO:GO:0051536 |
| GO:GO:0051539 | GO:GO:0061798 | InterPro:IPR013785 | HAMAP:MF_01225_B | InterPro:Main_SPASM_domain-containing | InterPro:MoaA |
| InterPro:MoaA_NifB_PqqE_Fe-S-bd_CS | InterPro:Mob_synth_C | RefSeq:NP_001031461.1 | RefSeq:NP_001189652.1 | RefSeq:NP_001324731.1 | RefSeq:NP_850177.2 |
| ProteinID:OAP11281.1 | PFAM:PF04055 | PFAM:PF06463 | PFAM:PF13353 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01305 |
| PANTHER:PTHR22960 | PANTHER:PTHR22960:SF0 | UniProt:Q39055 | SMART:SM00729 | InterPro:SPASM/twitch_domain-containing | SUPFAM:SSF102114 |
| TIGRFAMs:TIGR02666 | UniParc:UPI0000001792 | EMBL:Z48047 | InterPro:rSAM | SEG:seg | : |
Description
CNX2CNX2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P6]
Coordinates
chr2:-:13583985..13586703
Molecular Weight (calculated)
43416.0 Da
IEP (calculated)
8.952
GRAVY (calculated)
-0.154
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRCFSKITD CHLGFKNSNF LLVGSEVGSG SVTRTITTTT SERLFSSSYA AHQVDQIKDN PVSDMLIDKF GRLHTYLRIS LTERCNLRCQ YCMPSEGVEL
101: TPKPQLLSQS EIVRLAGLFV SAGVNKIRLT GGEPTVRKDI EEICLQLSSL KGLKNLAITT NGITLAKKLP RLKECGLDSL NISLDTLVPA KFEFLTRRKG
201: HDRVMKSIDT AIELGYNPVK VNCVIMRGLN DDEICDFVEL TRDKPINVRF IEFMPFDGNV WNVKKLVPYA EVMDKVVKRF PSIKRMQDHP TETAKNFTID
301: GHCGSVSFIT SMTEHFCAGC NRLRLLADGN FKVCLFGPSE VSLRDPLRSG ADDEALREII GAAVKRKKAA HAGMLDIAKT ANRPMIHIGG
101: TPKPQLLSQS EIVRLAGLFV SAGVNKIRLT GGEPTVRKDI EEICLQLSSL KGLKNLAITT NGITLAKKLP RLKECGLDSL NISLDTLVPA KFEFLTRRKG
201: HDRVMKSIDT AIELGYNPVK VNCVIMRGLN DDEICDFVEL TRDKPINVRF IEFMPFDGNV WNVKKLVPYA EVMDKVVKRF PSIKRMQDHP TETAKNFTID
301: GHCGSVSFIT SMTEHFCAGC NRLRLLADGN FKVCLFGPSE VSLRDPLRSG ADDEALREII GAAVKRKKAA HAGMLDIAKT ANRPMIHIGG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.