Factsheet for HORVU5Hr1G014920.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G094650.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31955.1	HORVU2Hr1G094650.1	AT1G12520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G059400.1	Wheat	mitochondrion	86.43	88.46
TraesCS5D01G070900.1	Wheat	mitochondrion	86.43	87.53
TraesCS5B01G066700.1	Wheat	mitochondrion	85.39	87.39
Os12t0507000-01	Rice	mitochondrion	62.84	75.44
KXG30456	Sorghum	mitochondrion	62.0	75.38
Os02t0258900-01	Rice	mitochondrion	61.8	75.13
Zm00001d016866_P001	Maize	mitochondrion	61.17	72.17
PGSC0003DMT400074537	Potato	cytosol	51.77	71.47
GSMUA_Achr1P19680_001	Banana	mitochondrion	56.99	67.08
CDX84751	Canola	mitochondrion	52.19	67.02
Bra022872.1-P	Field mustard	mitochondrion	52.19	67.02
CDX79447	Canola	mitochondrion	51.77	66.49
AT2G31955.1	Thale cress	cytosol	52.4	64.36
Solyc01g073730.2.1	Tomato	nucleus	52.4	63.22
KRH13856	Soybean	mitochondrion	52.19	62.5
KRH43566	Soybean	cytosol, mitochondrion, plastid	51.77	62.0
VIT_13s0156g00170.t01	Wine grape	cytosol	54.28	52.0
CDY42083	Canola	extracellular, mitochondrion	11.69	38.89

Protein Annotations

KEGG:00790+4.1.99.22	Gene3D:3.20.20.70	MapMan:7.1.1.1	UniProt:A0A287QFH9	InterPro:Aldolase_TIM	InterPro:Elp3/MiaB/NifB
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006777	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019008	GO:GO:0019538	GO:GO:0046872	GO:GO:0051536	GO:GO:0051539
EnsemblPlantsGene:HORVU5Hr1G014920	EnsemblPlants:HORVU5Hr1G014920.3	InterPro:IPR013785	InterPro:Main_SPASM_domain-containing	InterPro:MoaA	InterPro:MoaA_NifB_PqqE_Fe-S-bd_CS
InterPro:Mob_synth_C	PFAM:PF04055	PFAM:PF06463	PFAM:PF13353	ScanProsite:PS01305	PANTHER:PTHR22960
PANTHER:PTHR22960:SF0	SMART:SM00729	InterPro:SPASM/twitch_domain-containing	SUPFAM:SSF102114	TIGRFAMs:TIGR02666	UniParc:UPI000B474B45
InterPro:rSAM	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:55450005..55464963

Molecular Weight (calculated)

53173.5 Da

IEP (calculated)

9.315

GRAVY (calculated)

-0.266

Length

479 amino acids

Sequence
(BLAST)

001: MQPAASHATS TLRRRLLSAS RRPPCLPPPT SRGAVTGERD PWSSPATPSS RSPTVVPPPP AAPAPRPLSA PVAGRWPHHQ LRRLNMPDHQ VDPMRVGLRS
101: LTSTSAPTRA TYAHRRSNAY STCCATKPEA LPVETPTSDM LVDSFGRFHN YLRISLTERC NLRCQYCMPA EGVELTPKAE LLSHHEIIRI ANLFVTSGVD
201: KIRLTGGEPT VRKDLEDICL HLSGLKGLKT IAMTTNGIVL SKKLPRLKEC GLNALNISLD TLIPAKFEFM TRRKGHSKVM ESIDTAIQLG YDPVKINCVV
301: MRGMNDDEIC DFVELTRHKP INVRFIEFMP FDGNVWNVKK LVPYAEILDK VRQRFKGVER LQDHPSDTAK NFKIDGHVGT ISFITSMTEH FCAGCNRLRL
401: LADGNFKVCL FGPSEVSLRE PIHSGIDDAG LKEIISAADQ VIALQYVPSE LQLTDFLTKA QTRAQHGFYL SKLSVVHPP

Best Arabidopsis Sequence Match ( AT2G31955.1 )
(BLAST)

001: MRRCFSKITD CHLGFKNSNF LLVGSEVGSG SVTRTITTTT SERLFSSSYA AHQVDQIKDN PVSDMLIDKF GRLHTYLRIS LTERCNLRCQ YCMPSEGVEL
101: TPKPQLLSQS EIVRLAGLFV SAGVNKIRLT GGEPTVRKDI EEICLQLSSL KGLKNLAITT NGITLAKKLP RLKECGLDSL NISLDTLVPA KFEFLTRRKG
201: HDRVMKSIDT AIELGYNPVK VNCVIMRGLN DDEICDFVEL TRDKPINVRF IEFMPFDGNV WNVKKLVPYA EVMDKVVKRF PSIKRMQDHP TETAKNFTID
301: GHCGSVSFIT SMTEHFCAGC NRLRLLADGN FKVCLFGPSE VSLRDPLRSG ADDEALREII GAAVKRKKAA HAGMLDIAKT ANRPMIHIGG

Arabidopsis Description

CNX2CNX2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.