Factsheet for GSMUA_Achr1P19680_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P24900_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31955.1	GSMUA_Achr4P24900_001	AT1G12520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074537	Potato	cytosol	70.02	82.13
KXG30456	Sorghum	mitochondrion	73.96	76.4
Os12t0507000-01	Rice	mitochondrion	73.71	75.19
Os02t0258900-01	Rice	mitochondrion	72.24	74.62
Bra022872.1-P	Field mustard	mitochondrion	67.57	73.73
CDX84751	Canola	mitochondrion	67.57	73.73
Solyc01g073730.2.1	Tomato	nucleus	71.74	73.55
CDX79447	Canola	mitochondrion	67.32	73.46
Zm00001d016866_P001	Maize	mitochondrion	73.22	73.4
KRH13856	Soybean	mitochondrion	70.52	71.75
AT2G31955.1	Thale cress	cytosol	67.81	70.77
KRH43566	Soybean	cytosol, mitochondrion, plastid	69.29	70.5
TraesCS5A01G059400.1	Wheat	mitochondrion	72.97	63.46
TraesCS5B01G066700.1	Wheat	mitochondrion	71.99	62.61
TraesCS5D01G070900.1	Wheat	mitochondrion	71.5	61.52
VIT_13s0156g00170.t01	Wine grape	cytosol	71.74	58.4
HORVU5Hr1G014920.3	Barley	mitochondrion	67.08	56.99
CDY42083	Canola	extracellular, mitochondrion	14.74	41.67

Protein Annotations

KEGG:00790+4.1.99.22	Gene3D:3.20.20.70	MapMan:7.1.1.1	InterPro:Aldolase_TIM	InterPro:Elp3/MiaB/NifB	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006777	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019008	GO:GO:0019538	GO:GO:0046872	GO:GO:0051536	GO:GO:0051539	EnsemblPlantsGene:GSMUA_Achr1G19680_001
EnsemblPlants:GSMUA_Achr1P19680_001	EnsemblPlants:GSMUA_Achr1T19680_001	InterPro:IPR013785	UniProt:M0S1C6	HAMAP:MF_01225_B	InterPro:Main_SPASM_domain-containing
InterPro:MoaA	InterPro:MoaA_NifB_PqqE_Fe-S-bd_CS	InterPro:Mob_synth_C	PFAM:PF04055	PFAM:PF06463	PFAM:PF13353
ScanProsite:PS01305	PANTHER:PTHR22960	PANTHER:PTHR22960:SF0	SMART:SM00729	InterPro:SPASM/twitch_domain-containing	SUPFAM:SSF102114
TIGRFAMs:TIGR02666	UniParc:UPI00029644B3	InterPro:rSAM	SEG:seg	:	:

Description

Molybdopterin biosynthesis protein CNX2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G19680_001]

Coordinates

chr1:+:14736070..14739759

Molecular Weight (calculated)

45167.2 Da

IEP (calculated)

8.790

GRAVY (calculated)

-0.141

Length

407 amino acids

Sequence
(BLAST)

001: MRGCVRELLQ GCLRSRRAYF SVDGSRCRFG CLSDSYGSSG RIKGCCPSVG TPSCSRSMAS ATSCAVLSEA LPKDKDNLAS DMLIDSFGRF HNYLRISLTE
101: RCNLRCHYCM PAEGVELTPN SQLLSHDEIV RLANLFVTSG VDKIRLTGGE PTIRKDIEDI CLSLSSLKGL KTLAMTTNGI VLTKKLPKLK ECGVNAINIS
201: LDTLVPAKFE FMTRRKGHER VMESIDAAIE LGYNPVKINC VVMRGLNDDE ICDFVEMTRE KPINVRFIEF MPFDGNVWNV KKLVPYAEML DRVRQRFKNV
301: QRLKDHPADT AKNFVVEGHR GTVSFITSMT EHFCAGCNRL RLLADGNFKV CLFGPAEVSL RDPIRAGVDD LGLKEIIGAA VKRKKAAHAG MFDLAKTTNR
401: PMIHIGG

Best Arabidopsis Sequence Match ( AT2G31955.1 )
(BLAST)

001: MRRCFSKITD CHLGFKNSNF LLVGSEVGSG SVTRTITTTT SERLFSSSYA AHQVDQIKDN PVSDMLIDKF GRLHTYLRIS LTERCNLRCQ YCMPSEGVEL
101: TPKPQLLSQS EIVRLAGLFV SAGVNKIRLT GGEPTVRKDI EEICLQLSSL KGLKNLAITT NGITLAKKLP RLKECGLDSL NISLDTLVPA KFEFLTRRKG
201: HDRVMKSIDT AIELGYNPVK VNCVIMRGLN DDEICDFVEL TRDKPINVRF IEFMPFDGNV WNVKKLVPYA EVMDKVVKRF PSIKRMQDHP TETAKNFTID
301: GHCGSVSFIT SMTEHFCAGC NRLRLLADGN FKVCLFGPSE VSLRDPLRSG ADDEALREII GAAVKRKKAA HAGMLDIAKT ANRPMIHIGG

Arabidopsis Description

CNX2CNX2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.