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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, extracellular

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • extracellular 3
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion
Any Predictor:extracellular, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84751 Canola mitochondrion 47.22 18.23
CDX79447 Canola mitochondrion 46.53 17.96
PGSC0003DMT400074537 Potato cytosol 42.36 17.58
KRH43566 Soybean cytosol, mitochondrion, plastid 43.06 15.5
Solyc01g073730.2.1 Tomato nucleus 42.36 15.37
KRH13856 Soybean mitochondrion 42.36 15.25
GSMUA_Achr1P19680_001 Banana mitochondrion 41.67 14.74
KXG30456 Sorghum mitochondrion 39.58 14.47
Zm00001d016866_P001 Maize mitochondrion 39.58 14.04
Os02t0258900-01 Rice mitochondrion 38.19 13.96
Os12t0507000-01 Rice mitochondrion 38.19 13.78
VIT_13s0156g00170.t01 Wine grape cytosol 43.75 12.6
TraesCS5A01G059400.1 Wheat mitochondrion 38.89 11.97
TraesCS5B01G066700.1 Wheat mitochondrion 38.89 11.97
TraesCS5D01G070900.1 Wheat mitochondrion 38.89 11.84
HORVU5Hr1G014920.3 Barley mitochondrion 38.89 11.69
Protein Annotations
EnsemblPlants:CDY42083EnsemblPlantsGene:GSBRNA2T00074124001Gene3D:3.20.20.70GO:A0A078HZD2GO:GO:0003674GO:GO:0003824
InterPro:Aldolase_TIMInterPro:IPR013785PANTHER:PTHR22960ProteinID:CDY42083ProteinID:CDY42083.1SUPFAM:SSF102114
UniParc:UPI0004EDE80FUniProt:A0A078HZD2MapMan:35.1:::
Description
BnaA05g11030DBnaA05g11030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZD2]
Coordinates
chrLK032514:-:122081..123144
Molecular Weight (calculated)
16948.2 Da
IEP (calculated)
7.752
GRAVY (calculated)
0.320
Length
144 amino acids
Sequence
(BLAST)
001: MLKLCYLLTR LVQAQYQETM LRPVIILYES FGSLSWSIRD HRFIPKLKES GLDSINMSLD TLVLAKFEFL TIPIKDSFHL LAVERYLMLM CCQLVMEGLN
101: DDAICDFVKL TRNNPINVRF IAFIHFMWKC LECKETCALR TYHV
Best Arabidopsis Sequence Match ( AT2G31955.3 )
(BLAST)
001: MRRCFSKITD CHLGFKNSNF LLVGSEVGSG SVTRTITTTT SERLFSSSYA AHQVDQIKDN PVSDMLIDKF GRLHTYLRIS LTERCNLRCQ YCMPSEGVEL
101: TPKPQLLSQS EIVRLAGLFV SAGVNKIRLT GGEPTVRKDI EEICLQLSSL KGLKNLAITT NGITLAKKLP RLKECGLDSL NISLDTLVPA KFEFLTRRKG
201: HDRVMKSIDT AIELGYNPVK VNCVIMRGLN DDEICDFVEL TRDKPINVRF IEFMPFDGNV WNVKKLVPYA EVMDKVVKRF PSIKRMQDHP TETAKNFTID
301: GHCGSVSFIT SMTEHFCAGC NRLRLLADGN FKVSLRDPLR SGADDEALRE IIGAAVKRKK AAHAGMLDIA KTANRPMIHI GG
Arabidopsis Description
CNX2CNX2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.