Factsheet for Zm00001d032815_P011

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002122_P007
Zm00001d016866_P001
Zm00001d026425_P003
Zm00001d045580_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53180.1	Zm00001d002122_P007	AT1G14340.1	21798944
AT3G53180.1	Zm00001d026425_P003	AT1G14340.1	21798944
AT3G53180.1	Zm00001d016866_P001	AT2G31955.1	21798944
AT3G53180.1	Zm00001d045580_P001	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031055_P001	Maize	cytosol	18.76	98.14
Zm00001d047936_P001	Maize	cytosol	20.31	95.53
Zm00001d044569_P001	Maize	cytosol	20.31	95.53
Zm00001d033947_P001	Maize	cytosol	12.47	93.75
EER91525	Sorghum	cytosol	93.71	93.71
TraesCS1D01G141800.1	Wheat	golgi	82.78	82.78
TraesCS1B01G158600.1	Wheat	cytosol	82.54	82.54
TraesCS1A01G143000.1	Wheat	cytosol	82.19	82.28
Os10t0456500-02	Rice	plasma membrane	82.07	81.78
HORVU1Hr1G038060.9	Barley	cytosol	81.59	81.4
TraesCS6D01G065600.1	Wheat	cytosol	71.62	73.99
HORVU6Hr1G012290.5	Barley	cytosol	72.09	72.0
GSMUA_AchrUn_...	Banana	cytosol	26.01	68.44
GSMUA_AchrUn_...	Banana	cytosol	40.26	65.57
Zm00001d021367_P001	Maize	cytosol	16.03	65.22
VIT_08s0007g04670.t01	Wine grape	cytosol	64.37	64.52
PGSC0003DMT400072665	Potato	cytosol	26.84	64.02
Solyc10g083830.1.1	Tomato	extracellular	46.44	63.78
Solyc01g056400.1.1	Tomato	endoplasmic reticulum, extracellular	4.99	63.64
KRH32570	Soybean	cytosol, nucleus	62.11	62.56
Bra006975.1-P	Field mustard	cytosol	61.28	60.92
CDX78151	Canola	cytosol	61.28	60.92
CDY13313	Canola	cytosol	58.67	60.39
CDX73575	Canola	cytosol	58.67	60.24
AT3G53180.1	Thale cress	cytosol	60.93	60.21
Bra028548.1-P	Field mustard	cytosol	58.31	60.1
CDX67559	Canola	cytosol	59.03	59.74
KRH32567	Soybean	endoplasmic reticulum	27.91	54.52
Solyc10g083550.1.1	Tomato	cytosol	25.18	53.13
PGSC0003DMT400024814	Potato	cytosol	18.29	51.16
PGSC0003DMT400048935	Potato	cytosol	15.08	47.21
PGSC0003DMT400072398	Potato	cytosol	26.13	46.91
Solyc06g011330.1.1	Tomato	cytosol	16.39	46.31
Solyc10g083850.1.1	Tomato	cytosol	45.37	45.86
PGSC0003DMT400072666	Potato	cytosol	46.08	45.81
KRH75546	Soybean	plastid	12.35	45.22
Solyc10g083840.1.1	Tomato	cytosol	8.43	44.1
PGSC0003DMT400024816	Potato	cytosol	16.51	43.44
Solyc01g056430.1.1	Tomato	cytosol	16.98	43.33
Solyc01g056450.1.1	Tomato	cytosol	12.35	42.62
Solyc01g056390.1.1	Tomato	cytosol, nucleus	5.46	42.2
Solyc06g011290.1.1	Tomato	cytosol	18.53	40.0
PGSC0003DMT400048929	Potato	cytosol, plastid	7.84	38.37
PGSC0003DMT400048927	Potato	cytosol	6.29	34.64

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	Gene3D:3.10.20.70	Gene3D:3.20.20.140
Gene3D:3.30.590.10	MapMan:35.2	UniProt:A0A1D6KU77	InterPro:Amidohydro-rel	GO:GO:0003674	GO:GO:0003824
GO:GO:0004356	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016787	GO:GO:0016874	InterPro:Gln_synt_N	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_cat_dom
InterPro:IPR036651	InterPro:Metal_Hydrolase	ProteinID:ONM06132.1	PFAM:PF00120	PFAM:PF04909	PANTHER:PTHR43785
PANTHER:PTHR43785:SF2	SMART:SM01230	SUPFAM:SSF51556	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI0008437BDE
EnsemblPlantsGene:Zm00001d032815	EnsemblPlants:Zm00001d032815_P011	EnsemblPlants:Zm00001d032815_T011	:	:	:

Description

glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases

Coordinates

chr1:-:239121648..239145354

Molecular Weight (calculated)

93303.7 Da

IEP (calculated)

6.543

GRAVY (calculated)

-0.117

Length

842 amino acids

Sequence
(BLAST)

001: MEARYEVLRR ATEEVAAVDA HAHNLVEHGS AFPFLRCFSE AEGDALALAP HSLSFKRSLR DIAALYNCEA SLEKVEKFRS AEGLKSIGSK CFQAANISVI
101: LIDDGIAFDK MLDLESHKAF APVVGRVLRI ERLAETIINA ESFSGSSWTL DSFTESYISK LNSFSNQIVA LKSIAAYRSG LEINPNVSKT DAEDGLRKEL
201: TGPRPFRITN KNLIDYLFTC SLGIAVSLSL PVQIHTGFGD KDLDLRKCNP LHLRAVLEDE RFAKCQIVLL HASYPFSKEA SYLASVYSQV YLDFGLAIPK
301: LSVHGMTSSL KELLELAPIK KVMFSTDGYA FPETYYLGAK RARDVVYRVL SAACEDGDLS IQEAIEAIED IFRRNALNLY KLNVVNGSIN HETAIVGKRV
401: SLSSVEEDVL FVRIIWCDAS GQHRCRVVPA GRFYEITRNK GVGLTFAAMG MTSFCDGPAD GSNLTGVGEI RLVPDMPTLV RLPWSRHEEM VMADMQIRPG
501: EGWEYCPRNT LRKVTKVLLD EFNVTMKAGF ENEFFLRRKL VSNGVEMWIP YDNTNYCSTS AFDGASSILQ EVYSSLKDSG IVVEQLHAEA GKGQFEIALK
601: YILCTVAADK LIYARETIKS IARKHGLVAT FLPKPDLDDF GSGSHVHLSL WENDQNVFMG SSKDNFHGMS KTGEQFLAGV YHHLPSILAF TAPHPNSYDR
701: IQPDTWSGAY LCWGKENREA PLRTACPPGV PLDLVSNFEI KSFDGCANPH LGLAAIVAAG IDGLRRHLKL PEPIESNPSD HSSKLKRLPQ NLQESVESLS
801: ADKVLHELIG DKLVTTAIAI RKAEINHFAK NPGALKDLID RY

Best Arabidopsis Sequence Match ( AT3G53180.1 )
(BLAST)

001: MEFSELKEAI EKIELVDAHA HNIVSLDSSF PFIGTFSEAA GDALTFAPHS LSFKRNLREI AQLYGTEVSL EAVEEHRKTS GLDSFTSKCF KEARISALLI
101: DDGLKLDKKH DIEWHRNFVP FVGRVLRIET LAEQILEEEC PGGYFYGSES TEPPVWDLDS FTKTFVERLN SLVPEIVALK TIAAYRSGLD IDTYVSKEVA
201: ENGLVEVLRA GKPVRIGNKG LIDYILTISL EVAVRRDLPL QIHTGFGDKD LDLRLSNPLH LRTLLEDKRF GKCRIVLLHA AYPFSKEASF LSSVYPQVYL
301: DFGLAVPKLS VHGMVSSVKE LLDLASIKKV MFSTDGYASP ETYYLGAKKA REVIFLVLSD ACASGDLSLM EAIDAAKDIF SRNSIGFYKL NIDTDSSSPQ
401: NIISPKLKIK EPDVQEDSSS FVRIIWVDTS GQQRCRAVQA QRFNRSVKKN GVGLTFASMG MTSFTDGPAE ESKLTGVGEI RLVPDLSTKQ TIPWTKQESM
501: VLADMQLKPG EAWGYCPRET LRRVAKVLKD EFDLVMNAGF ENEFYLLKNV VREGKEEYMP FDFGPYCATS SFDAASPIFH DIVPALESLN IEVEQFHAES
601: GKGQFEVSLG HTIASHAADN LVYTREVIRS VARKQGLLAT FVPKYDYCDI GSGSHVHLSL WKNGENVFPA SNNSSSHGIS SVGEEFMAGV LFHLPSILAI
701: IAPLPNSYDR IQPNTWSGAF QCWGKENREA ALRAASPPGT PDGLVTNFEI KSFDGSANPH LGLAVIMAAG IDGLRRHLQL PTPIDINPAD VAATLNRLPE
801: TLSEAVEALD KDKVLHDLLG QKLLVAIKGV RKAEVEYYSK NPDAYKQLIH RY

Arabidopsis Description

Nodulin/glutamine synthase-like protein [Source:UniProtKB/TrEMBL;Acc:F4J9A0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.