Factsheet for GSMUA_AchrUn_randomP17130_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P19680_001
GSMUA_Achr3P19960_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53180.1	GSMUA_Achr3P19960_001	AT1G14340.1	21798944
AT3G53180.1	GSMUA_Achr1P19680_001	AT2G31955.1	21798944
AT3G53180.1	GSMUA_AchrUn_...	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g056400.1.1	Tomato	endoplasmic reticulum, extracellular	10.94	53.03
PGSC0003DMT400024814	Potato	cytosol	45.0	47.84
Solyc01g056390.1.1	Tomato	cytosol, nucleus	15.62	45.87
Solyc10g083840.1.1	Tomato	cytosol	22.81	45.34
KRH75546	Soybean	plastid	31.25	43.48
PGSC0003DMT400048935	Potato	cytosol	35.62	42.38
Solyc01g056430.1.1	Tomato	cytosol	42.19	40.91
KRH32567	Soybean	endoplasmic reticulum	51.56	38.28
Solyc06g011290.1.1	Tomato	cytosol	45.31	37.18
Os10t0456500-02	Rice	plasma membrane	70.62	26.75
Zm00001d032815_P011	Maize	cytosol	68.44	26.01
HORVU1Hr1G038060.9	Barley	cytosol	68.44	25.95
TraesCS1B01G158600.1	Wheat	cytosol	68.12	25.89
TraesCS1A01G143000.1	Wheat	cytosol	67.5	25.68
EER91525	Sorghum	cytosol	67.5	25.65
TraesCS1D01G141800.1	Wheat	golgi	67.5	25.65
VIT_08s0007g04670.t01	Wine grape	cytosol	64.69	24.64
KRH32570	Soybean	cytosol, nucleus	63.12	24.16
Bra006975.1-P	Field mustard	cytosol	62.19	23.49
CDX78151	Canola	cytosol	62.19	23.49
CDY13313	Canola	cytosol	59.69	23.35
CDX73575	Canola	cytosol	59.38	23.17
Bra028548.1-P	Field mustard	cytosol	59.06	23.13
HORVU6Hr1G012290.5	Barley	cytosol	60.94	23.13
CDX67559	Canola	cytosol	60.0	23.08
AT3G53180.1	Thale cress	cytosol	60.94	22.89
TraesCS6D01G065600.1	Wheat	cytosol	57.81	22.7
PGSC0003DMT400072666	Potato	cytosol	51.56	19.48
Solyc10g083850.1.1	Tomato	cytosol	49.06	18.85
Solyc10g083830.1.1	Tomato	extracellular	22.5	11.75
Zm00001d021367_P001	Maize	cytosol	2.19	3.38
Solyc10g083550.1.1	Tomato	cytosol	3.12	2.51
Zm00001d031055_P001	Maize	cytosol	1.25	2.48
Solyc06g011330.1.1	Tomato	cytosol	2.19	2.35
Zm00001d044569_P001	Maize	cytosol	1.25	2.23
Zm00001d047936_P001	Maize	cytosol	1.25	2.23
PGSC0003DMT400024816	Potato	cytosol	1.88	1.88
PGSC0003DMT400072398	Potato	cytosol	2.19	1.49
Solyc01g056450.1.1	Tomato	cytosol	0.94	1.23
GSMUA_AchrUn_...	Banana	cytosol	1.56	0.97
PGSC0003DMT400072665	Potato	cytosol	0.62	0.57
PGSC0003DMT400048929	Potato	cytosol, plastid	0.0	0.0
PGSC0003DMT400048927	Potato	cytosol	0.0	0.0
Zm00001d033947_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP17130_001	EnsemblPlants:GSMUA_AchrUn_randomT17130_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG17130_001	Gene3D:3.20.20.140	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:Amidohydro-rel	PANTHER:PTHR43785	PANTHER:PTHR43785:SF2	PFAM:PF04909	SEG:seg
UniParc:UPI000295B080	UniProt:M0U9X2	MapMan:35.2	:	:	:

Description

Putative Protein fluG [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17130_001]

Coordinates

chrchrUn_random:-:81045233..81050583

Molecular Weight (calculated)

35728.1 Da

IEP (calculated)

6.183

GRAVY (calculated)

0.059

Length

320 amino acids

Sequence
(BLAST)

001: MEGKYKELRT AVDAVAAVDA HAHNLVDVDS SFPFLRCFSE AEGDALSLAP HTLSFKRSLR DIAALYNCRA SLDELESHRK SSGLLSITAK CFEAANVSAV
101: LIDDGILFDK MCDLEWHKSF APAVGRILRI EHLAETILND EAYDTSRWTM DLFIETFLTR MKSYPFLSGL QIDTEVSKAD AEKGLLADLN AGRPVRIKNK
201: SFIDFLFICS LEVATSFDLP MQVHTGFGDK DLDLRQSNPL HLRKVLEDKR FSKSQIVLLH ASYPFSKEAS YLASVYSQIY LDFGLAVPKL SVQGMIASLK
301: ELLELAPIKK VYHLVSVVAL

Best Arabidopsis Sequence Match ( AT3G53180.1 )
(BLAST)

001: MEFSELKEAI EKIELVDAHA HNIVSLDSSF PFIGTFSEAA GDALTFAPHS LSFKRNLREI AQLYGTEVSL EAVEEHRKTS GLDSFTSKCF KEARISALLI
101: DDGLKLDKKH DIEWHRNFVP FVGRVLRIET LAEQILEEEC PGGYFYGSES TEPPVWDLDS FTKTFVERLN SLVPEIVALK TIAAYRSGLD IDTYVSKEVA
201: ENGLVEVLRA GKPVRIGNKG LIDYILTISL EVAVRRDLPL QIHTGFGDKD LDLRLSNPLH LRTLLEDKRF GKCRIVLLHA AYPFSKEASF LSSVYPQVYL
301: DFGLAVPKLS VHGMVSSVKE LLDLASIKKV MFSTDGYASP ETYYLGAKKA REVIFLVLSD ACASGDLSLM EAIDAAKDIF SRNSIGFYKL NIDTDSSSPQ
401: NIISPKLKIK EPDVQEDSSS FVRIIWVDTS GQQRCRAVQA QRFNRSVKKN GVGLTFASMG MTSFTDGPAE ESKLTGVGEI RLVPDLSTKQ TIPWTKQESM
501: VLADMQLKPG EAWGYCPRET LRRVAKVLKD EFDLVMNAGF ENEFYLLKNV VREGKEEYMP FDFGPYCATS SFDAASPIFH DIVPALESLN IEVEQFHAES
601: GKGQFEVSLG HTIASHAADN LVYTREVIRS VARKQGLLAT FVPKYDYCDI GSGSHVHLSL WKNGENVFPA SNNSSSHGIS SVGEEFMAGV LFHLPSILAI
701: IAPLPNSYDR IQPNTWSGAF QCWGKENREA ALRAASPPGT PDGLVTNFEI KSFDGSANPH LGLAVIMAAG IDGLRRHLQL PTPIDINPAD VAATLNRLPE
801: TLSEAVEALD KDKVLHDLLG QKLLVAIKGV RKAEVEYYSK NPDAYKQLIH RY

Arabidopsis Description

Nodulin/glutamine synthase-like protein [Source:UniProtKB/TrEMBL;Acc:F4J9A0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.