Factsheet for Solyc01g056450.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g073730.2.1
Solyc02g082060.1.1
Solyc05g007200.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53180.1	Solyc05g007200.2.1	AT1G14340.1	21798944
AT3G53180.1	Solyc01g073730.2.1	AT2G31955.1	21798944
AT3G53180.1	Solyc02g082060.1.1	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033947_P001	Maize	cytosol	16.8	36.61
Zm00001d047936_P001	Maize	cytosol	25.41	34.64
Zm00001d044569_P001	Maize	cytosol	25.41	34.64
Zm00001d031055_P001	Maize	cytosol	22.54	34.16
Solyc06g011330.1.1	Tomato	cytosol	37.3	30.54
Zm00001d021367_P001	Maize	cytosol	22.13	26.09
Solyc10g083550.1.1	Tomato	cytosol	38.93	23.81
GSMUA_AchrUn_...	Banana	cytosol	45.08	21.28
Solyc10g083830.1.1	Tomato	extracellular	47.95	19.09
Solyc10g083850.1.1	Tomato	cytosol	47.54	13.93
VIT_08s0007g04670.t01	Wine grape	cytosol	45.9	13.33
KRH32570	Soybean	cytosol, nucleus	43.85	12.8
Bra028548.1-P	Field mustard	cytosol	41.8	12.48
Zm00001d032815_P011	Maize	cytosol	42.62	12.35
EER91525	Sorghum	cytosol	42.62	12.35
CDY13313	Canola	cytosol	41.39	12.35
CDX67559	Canola	cytosol	41.8	12.26
TraesCS1A01G143000.1	Wheat	cytosol	42.21	12.25
TraesCS1D01G141800.1	Wheat	golgi	42.21	12.23
TraesCS1B01G158600.1	Wheat	cytosol	42.21	12.23
HORVU1Hr1G038060.9	Barley	cytosol	42.21	12.2
Os10t0456500-02	Rice	plasma membrane	42.21	12.19
AT3G53180.1	Thale cress	cytosol	41.8	11.97
CDX73575	Canola	cytosol	40.16	11.95
Bra006975.1-P	Field mustard	cytosol	41.39	11.92
CDX78151	Canola	cytosol	41.39	11.92
TraesCS6D01G065600.1	Wheat	cytosol	39.34	11.78
HORVU6Hr1G012290.5	Barley	cytosol	37.7	10.91
PGSC0003DMT400048929	Potato	cytosol, plastid	3.28	4.65
GSMUA_AchrUn_...	Banana	cytosol	1.23	0.94
KRH32567	Soybean	endoplasmic reticulum	0.41	0.23
Solyc10g083840.1.1	Tomato	cytosol	0.0	0.0
Solyc06g011290.1.1	Tomato	cytosol	0.0	0.0
Solyc01g056430.1.1	Tomato	cytosol	0.0	0.0
Solyc01g056400.1.1	Tomato	endoplasmic reticulum, extracellular	0.0	0.0
Solyc01g056390.1.1	Tomato	cytosol, nucleus	0.0	0.0
PGSC0003DMT400048935	Potato	cytosol	0.0	0.0
KRH75546	Soybean	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc01g056450.1.1	EnsemblPlantsGene:Solyc01g056450.1	Gene3D:3.30.590.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_cat_dom	KEGG:00220+6.3.1.2
KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	PANTHER:PTHR43785	PANTHER:PTHR43785:SF2	PFAM:PF00120
SMART:SM01230	SUPFAM:SSF55931	UniParc:UPI000276355B	UniProt:K4AVL3	MapMan:35.2	:

Description

No Description!

Coordinates

chr1:+:54173832..54176783

Molecular Weight (calculated)

27216.9 Da

IEP (calculated)

6.708

GRAVY (calculated)

-0.045

Length

244 amino acids

Sequence
(BLAST)

001: MFLVNRDMFK MQLHPEAGKG QFEIVLGYID CGRAANNLIS TDEVIKGIAR KHGLLASFTP RYHTNNVHLG SYADFSDDDV GSGSHVHIGL FKNGKNIFMA
101: SGEANRYGMS VIGESFMAGI LDHLRSLCVF TIKELPVRAC CPPGASNGVV TNFEMKIFDV CANPYLGLAS IIIAGIDGMR RKLPIPQPVE PHSYDFDWNN
201: EDIKLPWSLT DAIINMDSDK WFNDMLCKEF IWTRGGVVGV RYKF

Best Arabidopsis Sequence Match ( AT3G17900.1 )
(BLAST)

001: MNFLLRSASS ATHRPPVIEP PATPPQPPPE TAKPGVTLEG LIAEEHFPQY PSVDEDLDRV GDGSGDLDGN GESNAKSGGS GMERFSDVSE EQGWIAIPYK
101: EIPDNWSESV DIHSLRSLDR SFVFPGEQIQ ILACLSESKG DTEIITPFKV AEVMSRTGQR KVSDKQNGDM SDGASTPSGD GEMSPDAQFA TQNGDSPCKE
201: SLDSQKDLSD GESILRMEDH KRRTEDLLSR FQKSHFFVRI AESGEPLWSK KSSLVADTEM DEERKRTKSR PCVSAFVDRG DFDPNVSGGV ARSKAKCCAL
301: PNGDIVVSLQ VYIVDCPKEP IIEILQFEKH QDQDQNPEND KDPYGNLLKW LIPLDNTISQ QPRSLPPPIT PSPSISSTAH KPAISSTSGS QLFSFGHFRS
401: YSMSALPPNT APVTGPIKTQ SSKPSFDIED WDSYSGQTVR NGQKSGTEEL LSFRGVALER DRFSVRCGLE GICIPGRRWR RKLEIIQPIE INSFAADCNT
501: DDLLCVQIKN VAPTHAPDIV IYIDAITIVF EEAGKNASPS SVPIACIEAG NEHSLPNLTL RKGEEHSFIV KPAFSVGSNL KPSAARNKLK SSSLSLPTVN
601: FERKGSGLSG DQYAVMVSCR CNYTESRLFF KQRTKWRPRV SRDLMISVAS EMSGEPCGPH GRASQLPVQI LTLQASNLTS EDLSLTVLAP ASFTSPPTVV
701: SLNSTPTTPI SPFLGFSDFT ERVQNEKRNT TVRKQQSLPP IPLETRTENN TNGESSNPSD VVPKSGLGCT HLWLQSRVPL GCVPSKSTAT IKLELLPLTD
801: GIITLDTLQI HAKEKGRRYI PEQSLKINAT SSISSGIF

Arabidopsis Description

At3g17900/MEB5_12 [Source:UniProtKB/TrEMBL;Acc:Q9ASZ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.