Factsheet for HORVU6Hr1G012290.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G115210.1
HORVU5Hr1G014920.3
HORVU7Hr1G002080.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53180.1	HORVU2Hr1G115210.1	AT1G14340.1	21798944
AT3G53180.1	HORVU5Hr1G014920.3	AT2G31955.1	21798944
AT3G53180.1	HORVU7Hr1G002080.2	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G065600.1	Wheat	cytosol	88.37	91.41
HORVU1Hr1G038060.9	Barley	cytosol	74.02	73.93
Zm00001d047936_P001	Maize	cytosol	15.66	73.74
Zm00001d044569_P001	Maize	cytosol	15.66	73.74
EER91525	Sorghum	cytosol	72.84	72.92
Zm00001d031055_P001	Maize	cytosol	13.88	72.67
Os10t0456500-02	Rice	plasma membrane	72.84	72.66
Zm00001d032815_P011	Maize	cytosol	72.0	72.09
Zm00001d033947_P001	Maize	cytosol	8.78	66.07
GSMUA_AchrUn_...	Banana	cytosol	23.13	60.94
PGSC0003DMT400072665	Potato	cytosol	24.67	58.92
GSMUA_AchrUn_...	Banana	cytosol	35.71	58.22
VIT_08s0007g04670.t01	Wine grape	cytosol	58.01	58.21
KRH32570	Soybean	cytosol, nucleus	57.06	57.54
Solyc10g083830.1.1	Tomato	extracellular	41.76	57.42
Bra006975.1-P	Field mustard	cytosol	55.87	55.61
CDX78151	Canola	cytosol	55.87	55.61
Zm00001d021367_P001	Maize	cytosol	13.52	55.07
CDY13313	Canola	cytosol	53.26	54.89
CDX73575	Canola	cytosol	53.38	54.88
AT3G53180.1	Thale cress	cytosol	55.28	54.69
CDX67559	Canola	cytosol	53.97	54.69
Bra028548.1-P	Field mustard	cytosol	52.91	54.59
Solyc01g056400.1.1	Tomato	endoplasmic reticulum, extracellular	4.27	54.55
Solyc10g083550.1.1	Tomato	cytosol	24.08	50.88
KRH32567	Soybean	endoplasmic reticulum	24.32	47.56
PGSC0003DMT400024814	Potato	cytosol	16.84	47.18
Solyc06g011330.1.1	Tomato	cytosol	16.49	46.64
PGSC0003DMT400072398	Potato	cytosol	24.91	44.78
PGSC0003DMT400072666	Potato	cytosol	43.77	43.57
Solyc10g083850.1.1	Tomato	cytosol	42.47	42.98
Solyc01g056390.1.1	Tomato	cytosol, nucleus	5.34	41.28
Solyc01g056430.1.1	Tomato	cytosol	16.13	41.21
PGSC0003DMT400048935	Potato	cytosol	12.93	40.52
KRH75546	Soybean	plastid	11.03	40.43
PGSC0003DMT400024816	Potato	cytosol	15.18	40.0
PGSC0003DMT400048929	Potato	cytosol, plastid	8.07	39.53
Solyc10g083840.1.1	Tomato	cytosol	7.35	38.51
Solyc01g056450.1.1	Tomato	cytosol	10.91	37.7
Solyc06g011290.1.1	Tomato	cytosol	16.49	35.64
PGSC0003DMT400048927	Potato	cytosol	5.81	32.03

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	Gene3D:3.10.20.70	Gene3D:3.20.20.140
Gene3D:3.30.590.10	MapMan:35.2	UniProt:A0A287TBZ5	InterPro:Amidohydro-rel	GO:GO:0003674	GO:GO:0003824
GO:GO:0004356	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016787	InterPro:Gln_synt_N	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_cat_dom	EnsemblPlantsGene:HORVU6Hr1G012290
EnsemblPlants:HORVU6Hr1G012290.5	InterPro:IPR036651	InterPro:Metal_Hydrolase	PFAM:PF00120	PFAM:PF04909	PANTHER:PTHR43785
PANTHER:PTHR43785:SF2	SMART:SM01230	SUPFAM:SSF51556	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI000B470AE4
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:23927711..23941985

Molecular Weight (calculated)

93455.4 Da

IEP (calculated)

6.056

GRAVY (calculated)

-0.114

Length

843 amino acids

Sequence
(BLAST)

001: MDMEAKYADL RRAAEETAVV DAHAHDLLAA GSTLPFTRCF SEADGDALTL APHSLPFKRS LRDIAALYDC DASFEKVEEF RRAQGLSSIT SKCFQAANIS
101: ALVVDDVSKF NEILELESHN AFAPKVYRIV GIETLAETII NEESLSGSSW TLDSFTEAFV AKLKSVTNKI VGLKSIAAHR SGLDIDPSVS KVDAEDGLQK
201: DLATRRPLRI TNKNLVDYIF IRSLEIAVEF HLPMQIHTGF GDRDVELRNC TPFHLRSLLE DKRFAKCQIV LLNASYPFSR EASYLASVYS QVYLDFGFAF
301: PKLSVQGITS SLKELLERAP IKKVMFSTDG YAFPETYYLG AKWARDIVYR VLLAACEDGD LTIQEAIEAV EDILRRNALH LYKLDVVHEK VINIDDNSTS
401: SSSCVKKDDV ILVRMVWNDA SGQHRCRALP AERFYGIARN KGVGLGIAAV GFTSFRDAPA AGTNLTCAGE EIRLVADMST LLRIPWSRNE EMVMADMITG
501: SGEASEYCPR NALRKVIKVL LDEFNVTVMA GFENEFYLLR KSFSEGHEQW VPYDNSSYCS TSAFDGASSI LKEAYSCLKA AEIVVEQMHA EGGNGQFEIA
601: LKYVLCTLAA DNQIYAREII KSVARKHGVI ATFLPKPDLN ELGSGCHVHL SLWENDQNVF MGSNKYSYHG MSNTGERFLA GVYHHLPSIL AFTAPHPHSY
701: DRIQPHTFTG AYLCWGKENR EAPLRTSCPP GVPPDFVSNF EVRSFDGCAN PHLGLAAIVT AGIDGLRRGL KLPPPTELNP ADCASHERLP HDLLGSAEAL
801: AADEIFHELM GDKLVTSVIA MRKAEIEHYA KNPVAVHHLI HRY

Best Arabidopsis Sequence Match ( AT3G53180.1 )
(BLAST)

001: MEFSELKEAI EKIELVDAHA HNIVSLDSSF PFIGTFSEAA GDALTFAPHS LSFKRNLREI AQLYGTEVSL EAVEEHRKTS GLDSFTSKCF KEARISALLI
101: DDGLKLDKKH DIEWHRNFVP FVGRVLRIET LAEQILEEEC PGGYFYGSES TEPPVWDLDS FTKTFVERLN SLVPEIVALK TIAAYRSGLD IDTYVSKEVA
201: ENGLVEVLRA GKPVRIGNKG LIDYILTISL EVAVRRDLPL QIHTGFGDKD LDLRLSNPLH LRTLLEDKRF GKCRIVLLHA AYPFSKEASF LSSVYPQVYL
301: DFGLAVPKLS VHGMVSSVKE LLDLASIKKV MFSTDGYASP ETYYLGAKKA REVIFLVLSD ACASGDLSLM EAIDAAKDIF SRNSIGFYKL NIDTDSSSPQ
401: NIISPKLKIK EPDVQEDSSS FVRIIWVDTS GQQRCRAVQA QRFNRSVKKN GVGLTFASMG MTSFTDGPAE ESKLTGVGEI RLVPDLSTKQ TIPWTKQESM
501: VLADMQLKPG EAWGYCPRET LRRVAKVLKD EFDLVMNAGF ENEFYLLKNV VREGKEEYMP FDFGPYCATS SFDAASPIFH DIVPALESLN IEVEQFHAES
601: GKGQFEVSLG HTIASHAADN LVYTREVIRS VARKQGLLAT FVPKYDYCDI GSGSHVHLSL WKNGENVFPA SNNSSSHGIS SVGEEFMAGV LFHLPSILAI
701: IAPLPNSYDR IQPNTWSGAF QCWGKENREA ALRAASPPGT PDGLVTNFEI KSFDGSANPH LGLAVIMAAG IDGLRRHLQL PTPIDINPAD VAATLNRLPE
801: TLSEAVEALD KDKVLHDLLG QKLLVAIKGV RKAEVEYYSK NPDAYKQLIH RY

Arabidopsis Description

Nodulin/glutamine synthase-like protein [Source:UniProtKB/TrEMBL;Acc:F4J9A0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.