Factsheet for GSMUA_AchrUn_randomP17120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P19680_001
GSMUA_Achr3P19960_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53180.1	GSMUA_Achr3P19960_001	AT1G14340.1	21798944
AT3G53180.1	GSMUA_Achr1P19680_001	AT2G31955.1	21798944
AT3G53180.1	GSMUA_AchrUn_...	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031055_P001	Maize	cytosol	21.28	68.32
Zm00001d047936_P001	Maize	cytosol	23.02	66.48
Zm00001d044569_P001	Maize	cytosol	23.02	66.48
PGSC0003DMT400072665	Potato	cytosol	44.87	65.72
Zm00001d033947_P001	Maize	cytosol	14.12	65.18
Solyc10g083550.1.1	Tomato	cytosol	41.59	53.88
Solyc10g083830.1.1	Tomato	extracellular	62.48	52.69
Solyc06g011330.1.1	Tomato	cytosol	29.21	50.67
PGSC0003DMT400072398	Potato	cytosol	45.45	50.11
Zm00001d021367_P001	Maize	cytosol	19.73	49.28
PGSC0003DMT400048929	Potato	cytosol, plastid	15.67	47.09
Solyc01g056450.1.1	Tomato	cytosol	21.28	45.08
PGSC0003DMT400024816	Potato	cytosol	26.31	42.5
PGSC0003DMT400048927	Potato	cytosol	12.19	41.18
EER91525	Sorghum	cytosol	66.15	40.62
VIT_08s0007g04670.t01	Wine grape	cytosol	65.57	40.36
Zm00001d032815_P011	Maize	cytosol	65.57	40.26
Os10t0456500-02	Rice	plasma membrane	64.6	39.53
CDX73575	Canola	cytosol	62.48	39.39
TraesCS1D01G141800.1	Wheat	golgi	64.02	39.31
TraesCS1A01G143000.1	Wheat	cytosol	63.83	39.24
TraesCS1B01G158600.1	Wheat	cytosol	63.83	39.19
HORVU1Hr1G038060.9	Barley	cytosol	63.83	39.1
CDY13313	Canola	cytosol	61.7	39.0
Bra028548.1-P	Field mustard	cytosol	61.12	38.68
AT3G53180.1	Thale cress	cytosol	63.64	38.62
Bra006975.1-P	Field mustard	cytosol	62.86	38.37
CDX78151	Canola	cytosol	62.86	38.37
KRH32570	Soybean	cytosol, nucleus	61.51	38.04
CDX67559	Canola	cytosol	61.12	37.98
TraesCS6D01G065600.1	Wheat	cytosol	58.99	37.42
HORVU6Hr1G012290.5	Barley	cytosol	58.22	35.71
PGSC0003DMT400072666	Potato	cytosol	49.13	29.99
Solyc10g083850.1.1	Tomato	cytosol	46.42	28.81
KRH32567	Soybean	endoplasmic reticulum	7.74	9.28
Solyc01g056400.1.1	Tomato	endoplasmic reticulum, extracellular	0.97	7.58
PGSC0003DMT400048935	Potato	cytosol	1.74	3.35
Solyc06g011290.1.1	Tomato	cytosol	2.51	3.33
Solyc01g056430.1.1	Tomato	cytosol	1.93	3.03
PGSC0003DMT400024814	Potato	cytosol	1.74	2.99
GSMUA_AchrUn_...	Banana	cytosol	0.97	1.56
KRH75546	Soybean	plastid	0.0	0.0
Solyc10g083840.1.1	Tomato	cytosol	0.0	0.0
Solyc01g056390.1.1	Tomato	cytosol, nucleus	0.0	0.0

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	Gene3D:3.10.20.70	Gene3D:3.20.20.140
Gene3D:3.30.590.10	MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0006542
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_AchrUn_randomG17120_001
EnsemblPlants:GSMUA_AchrUn_randomP17120_001	EnsemblPlants:GSMUA_AchrUn_randomT17120_001	InterPro:Gln_synt_N	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_cat_dom	InterPro:IPR036651
UniProt:M0U9X1	PFAM:PF00120	PANTHER:PTHR43785	PANTHER:PTHR43785:SF2	SMART:SM01230	SUPFAM:SSF54368
SUPFAM:SSF55931	UniParc:UPI000294CC18	:	:	:	:

Description

Putative Protein fluG [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17120_001]

Coordinates

chrchrUn_random:-:81018366..81029317

Molecular Weight (calculated)

57584.7 Da

IEP (calculated)

5.811

GRAVY (calculated)

-0.205

Length

517 amino acids

Sequence
(BLAST)

001: MFSSDGYAFP ETFFLGAKRA REVVFSVLST ACDDGDLTLP EALEAAEDIF RRNSLQLYKL HGVVQSSISL NKTSMVTSHP DGIAFVRIIW IDTSAQHRCR
101: VIPVRRFYEV VKNSGVGLTM ASMGMTSFCD GPADGTNLTA VGEIRLLPDL TTKYRIPWAS QEEMVLADMQ IRPGEAWEYC PRNCLRRMSK ILKDEFNLEM
201: NAGFENEFYL LKNVIRDGKE QLVPFDKTRY CSTSAFDAAS PILQEVNSAL QSMDISVEQL HAEAGQGQFE LSLGHKESGL AADNLIYVRE VIRSIATKHG
301: LLATFLPKYR LDDIGSGSHV HLSLWESGKN VFIGSEASKT RHGMSELGEK FMAGVYYHLP SILAFIAPLP NSYERIQPNT WSGAYHCWGK ENREAPMRTA
401: CPPGVSRDLV SNFEIKSFDG CANPYLGLAS IIAAGIDGLR RNLSLPEPIE TNPSGHDSDV GRLPKELRES IGALSQDTVL IKFLGEELVT AVIGVRQAED
501: YYYRKNKDAV KELIYQY

Best Arabidopsis Sequence Match ( AT3G53180.1 )
(BLAST)

001: MEFSELKEAI EKIELVDAHA HNIVSLDSSF PFIGTFSEAA GDALTFAPHS LSFKRNLREI AQLYGTEVSL EAVEEHRKTS GLDSFTSKCF KEARISALLI
101: DDGLKLDKKH DIEWHRNFVP FVGRVLRIET LAEQILEEEC PGGYFYGSES TEPPVWDLDS FTKTFVERLN SLVPEIVALK TIAAYRSGLD IDTYVSKEVA
201: ENGLVEVLRA GKPVRIGNKG LIDYILTISL EVAVRRDLPL QIHTGFGDKD LDLRLSNPLH LRTLLEDKRF GKCRIVLLHA AYPFSKEASF LSSVYPQVYL
301: DFGLAVPKLS VHGMVSSVKE LLDLASIKKV MFSTDGYASP ETYYLGAKKA REVIFLVLSD ACASGDLSLM EAIDAAKDIF SRNSIGFYKL NIDTDSSSPQ
401: NIISPKLKIK EPDVQEDSSS FVRIIWVDTS GQQRCRAVQA QRFNRSVKKN GVGLTFASMG MTSFTDGPAE ESKLTGVGEI RLVPDLSTKQ TIPWTKQESM
501: VLADMQLKPG EAWGYCPRET LRRVAKVLKD EFDLVMNAGF ENEFYLLKNV VREGKEEYMP FDFGPYCATS SFDAASPIFH DIVPALESLN IEVEQFHAES
601: GKGQFEVSLG HTIASHAADN LVYTREVIRS VARKQGLLAT FVPKYDYCDI GSGSHVHLSL WKNGENVFPA SNNSSSHGIS SVGEEFMAGV LFHLPSILAI
701: IAPLPNSYDR IQPNTWSGAF QCWGKENREA ALRAASPPGT PDGLVTNFEI KSFDGSANPH LGLAVIMAAG IDGLRRHLQL PTPIDINPAD VAATLNRLPE
801: TLSEAVEALD KDKVLHDLLG QKLLVAIKGV RKAEVEYYSK NPDAYKQLIH RY

Arabidopsis Description

Nodulin/glutamine synthase-like protein [Source:UniProtKB/TrEMBL;Acc:F4J9A0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.