Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G423200.1 | Wheat | cytosol | 85.44 | 85.44 |
| Os03t0784900-01 | Rice | cytosol | 85.44 | 85.02 |
| TraesCS5D01G431800.1 | Wheat | cytosol | 85.44 | 84.62 |
| GSMUA_Achr5P02430_001 | Banana | endoplasmic reticulum, extracellular | 66.02 | 77.71 |
| Zm00001d034346_P002 | Maize | mitochondrion | 95.63 | 76.36 |
| TraesCS5B01G425200.1 | Wheat | cytosol | 85.92 | 71.37 |
| KRH11758 | Soybean | cytosol | 70.39 | 69.71 |
| KRH36758 | Soybean | cytosol | 67.96 | 67.96 |
| Bra022985.1-P | Field mustard | cytosol | 47.57 | 66.22 |
| AT2G34690.1 | Thale cress | cytosol | 66.02 | 66.02 |
| PGSC0003DMT400054370 | Potato | cytosol | 66.02 | 64.76 |
| CDX79572 | Canola | cytosol | 64.56 | 64.56 |
| Solyc02g070250.2.1 | Tomato | cytosol | 65.53 | 64.29 |
| CDX84635 | Canola | cytosol, endoplasmic reticulum, peroxisome | 63.11 | 63.11 |
| VIT_10s0003g04580.t01 | Wine grape | cytosol | 60.19 | 60.49 |
| HORVU5Hr1G103320.2 | Barley | nucleus, plastid | 84.47 | 60.0 |
| CDX84289 | Canola | cytosol | 29.13 | 57.69 |
| CDX87716 | Canola | cytosol | 33.98 | 55.56 |
| CDY43977 | Canola | cytosol | 33.98 | 55.56 |
| Bra022038.1-P | Field mustard | cytosol | 49.51 | 51.78 |
| CDX87706 | Canola | cytosol | 21.36 | 50.57 |
| CDY43980 | Canola | cytosol | 48.06 | 49.25 |
| Bra022041.1-P | Field mustard | cytosol | 48.06 | 49.25 |
| VIT_11s0052g00280.t01 | Wine grape | cytosol | 47.57 | 47.34 |
| VIT_11s0052g00260.t01 | Wine grape | cytosol, plastid | 46.6 | 46.6 |
| EER91001 | Sorghum | mitochondrion | 49.51 | 43.59 |
| CDX87707 | Canola | cytosol | 25.24 | 37.96 |
| VIT_11s0052g00220.t01 | Wine grape | cytosol | 25.24 | 36.62 |
| VIT_11s0052g00230.t01 | Wine grape | cytosol | 38.35 | 34.35 |
| VIT_11s0052g00240.t01 | Wine grape | cytosol | 39.81 | 20.97 |
Protein Annotations
| Gene3D:1.10.3520.10 | MapMan:5.4.6 | EntrezGene:8083921 | UniProt:C5WY80 | EnsemblPlants:EER90780 | ProteinID:EER90780 |
| ProteinID:EER90780.1 | InterPro:GLTP_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008219 | GO:GO:0008289 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009751 |
| GO:GO:0009816 | GO:GO:0009987 | GO:GO:0010175 | GO:GO:0015695 | GO:GO:0015791 | GO:GO:0016043 |
| GO:GO:0017089 | GO:GO:0051861 | GO:GO:0072488 | GO:GO:0120009 | GO:GO:0120013 | InterPro:Glycolipid_transfer_prot_dom |
| InterPro:IPR036497 | PFAM:PF08718 | PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 | EnsemblPlantsGene:SORBI_3001G066700 | SUPFAM:SSF110004 |
| unigene:Sbi.11165 | UniParc:UPI0001A82201 | RefSeq:XP_002463782.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:5066978..5070026
Molecular Weight (calculated)
22541.2 Da
IEP (calculated)
7.439
GRAVY (calculated)
-0.003
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSEAEKPL RRIAASFEEL AAVAKQQPPA SMDAGAFSRA CSNVSVLFGC LGIAFKFAEM DYVAKVDDLV EASKSILTLP SMVELDIQTD TVRKPGSHTR
101: NLLRVKRGID MVKVLFEQIL VTEGNSLRDA ASVAYAQVFA PHHGWAIRKA VAAGMYALPS KSQLLKKLNE DEESAKVQMQ NFVRSSAPVI CYVDDLFTSR
201: NLGIDW
101: NLLRVKRGID MVKVLFEQIL VTEGNSLRDA ASVAYAQVFA PHHGWAIRKA VAAGMYALPS KSQLLKKLNE DEESAKVQMQ NFVRSSAPVI CYVDDLFTSR
201: NLGIDW
001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
Arabidopsis Description
ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.