Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_09s0002g02400.t01 | |
| VIT_15s0048g00220.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34690.1 | VIT_09s0002g02400.t01 | AT1G55190.1 | 18845362 |
| AT2G34690.1 | VIT_09s0002g02400.t01 | AT3G13720.1 | 18845362 |
| AT2G34690.1 | VIT_15s0048g00220.t01 | AT3G60600.1 | 18845362 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P02430_001 | Banana | endoplasmic reticulum, extracellular | 63.9 | 74.86 |
| CDX79572 | Canola | cytosol | 69.27 | 68.93 |
| AT2G34690.1 | Thale cress | cytosol | 67.32 | 66.99 |
| Bra022985.1-P | Field mustard | cytosol | 48.29 | 66.89 |
| KRH36758 | Soybean | cytosol | 66.83 | 66.5 |
| CDX84635 | Canola | cytosol, endoplasmic reticulum, peroxisome | 66.34 | 66.02 |
| KRH11758 | Soybean | cytosol | 66.83 | 65.87 |
| Solyc02g070250.2.1 | Tomato | cytosol | 66.34 | 64.76 |
| PGSC0003DMT400054370 | Potato | cytosol | 65.37 | 63.81 |
| Os03t0784900-01 | Rice | cytosol | 60.98 | 60.39 |
| EER90780 | Sorghum | cytosol | 60.49 | 60.19 |
| TraesCS5A01G423200.1 | Wheat | cytosol | 59.51 | 59.22 |
| TraesCS5D01G431800.1 | Wheat | cytosol | 59.51 | 58.65 |
| CDX84289 | Canola | cytosol | 27.8 | 54.81 |
| Bra022038.1-P | Field mustard | cytosol | 49.27 | 51.27 |
| CDY43977 | Canola | cytosol | 30.73 | 50.0 |
| CDX87716 | Canola | cytosol | 30.73 | 50.0 |
| VIT_01s0011g03390.t01 | Wine grape | cytosol | 51.71 | 50.0 |
| VIT_11s0052g00280.t01 | Wine grape | cytosol | 50.24 | 49.76 |
| CDY43980 | Canola | cytosol | 48.78 | 49.75 |
| Bra022041.1-P | Field mustard | cytosol | 48.78 | 49.75 |
| Zm00001d034346_P002 | Maize | mitochondrion | 61.46 | 48.84 |
| TraesCS5B01G425200.1 | Wheat | cytosol | 59.02 | 48.79 |
| VIT_11s0052g00260.t01 | Wine grape | cytosol, plastid | 48.29 | 48.06 |
| CDX87706 | Canola | cytosol | 19.51 | 45.98 |
| CDX87707 | Canola | cytosol | 28.29 | 42.34 |
| HORVU5Hr1G103320.2 | Barley | nucleus, plastid | 58.05 | 41.03 |
| VIT_11s0052g00220.t01 | Wine grape | cytosol | 26.83 | 38.73 |
| VIT_11s0052g00230.t01 | Wine grape | cytosol | 38.05 | 33.91 |
| VIT_11s0052g00240.t01 | Wine grape | cytosol | 38.54 | 20.2 |
Protein Annotations
| Gene3D:1.10.3520.10 | EntrezGene:100258392 | wikigene:100258392 | MapMan:5.4.6 | ProteinID:CBI30993 | ProteinID:CBI30993.3 |
| UniProt:D7TKH1 | EMBL:FN595992 | InterPro:GLTP_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0120009 | GO:GO:0120013 | InterPro:Glycolipid_transfer_prot_dom | InterPro:IPR036497 | EntrezGene:LOC100258392 |
| wikigene:LOC100258392 | PFAM:PF08718 | PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 | SUPFAM:SSF110004 | TIGR:TC51992 |
| UniParc:UPI00015CB224 | ArrayExpress:VIT_10s0003g04580 | EnsemblPlantsGene:VIT_10s0003g04580 | EnsemblPlants:VIT_10s0003g04580.t01 | unigene:Vvi.2410 | RefSeq:XP_002281564 |
| RefSeq:XP_002281564.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:8112642..8129332
Molecular Weight (calculated)
22411.0 Da
IEP (calculated)
6.674
GRAVY (calculated)
0.012
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGDGDKAL RKIGEAFKEI ASAVNSQTVD IEVAPFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVNDLAK TSSSISTLSA LLDHDIEGNC VRKAGSNSRN
101: LLRVKRGLDM VRVLFEHMLA SDDNSLRNPA STAYAEVLAP HHGWAIRKAV AAGMYVLPTK AQLLARLNED EATARIQMQN YINASAPVIL YINKLFLTRE
201: LGIDW
101: LLRVKRGLDM VRVLFEHMLA SDDNSLRNPA STAYAEVLAP HHGWAIRKAV AAGMYVLPTK AQLLARLNED EATARIQMQN YINASAPVIL YINKLFLTRE
201: LGIDW
001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
Arabidopsis Description
ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.