Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_09s0002g02400.t01 | |
| VIT_15s0048g00220.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34690.1 | VIT_09s0002g02400.t01 | AT1G55190.1 | 18845362 |
| AT2G34690.1 | VIT_09s0002g02400.t01 | AT3G13720.1 | 18845362 |
| AT2G34690.1 | VIT_15s0048g00220.t01 | AT3G60600.1 | 18845362 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0052g00280.t01 | Wine grape | cytosol | 61.65 | 61.35 |
| GSMUA_Achr5P02430_001 | Banana | endoplasmic reticulum, extracellular | 45.15 | 53.14 |
| Bra022985.1-P | Field mustard | cytosol | 35.92 | 50.0 |
| KRH11758 | Soybean | cytosol | 50.49 | 50.0 |
| KRH36758 | Soybean | cytosol | 49.03 | 49.03 |
| PGSC0003DMT400054370 | Potato | cytosol | 49.51 | 48.57 |
| VIT_10s0003g04580.t01 | Wine grape | cytosol | 48.06 | 48.29 |
| Solyc02g070250.2.1 | Tomato | cytosol | 49.03 | 48.1 |
| CDX79572 | Canola | cytosol | 47.09 | 47.09 |
| EER90780 | Sorghum | cytosol | 46.6 | 46.6 |
| CDX84635 | Canola | cytosol, endoplasmic reticulum, peroxisome | 46.6 | 46.6 |
| VIT_11s0052g00220.t01 | Wine grape | cytosol | 32.04 | 46.48 |
| AT2G34690.1 | Thale cress | cytosol | 45.63 | 45.63 |
| Os03t0784900-01 | Rice | cytosol | 45.63 | 45.41 |
| TraesCS5A01G423200.1 | Wheat | cytosol | 43.69 | 43.69 |
| TraesCS5D01G431800.1 | Wheat | cytosol | 43.69 | 43.27 |
| CDX84289 | Canola | cytosol | 21.84 | 43.27 |
| VIT_11s0052g00230.t01 | Wine grape | cytosol | 45.15 | 40.43 |
| Bra022038.1-P | Field mustard | cytosol | 38.35 | 40.1 |
| CDX87706 | Canola | cytosol | 16.5 | 39.08 |
| CDY43980 | Canola | cytosol | 37.86 | 38.81 |
| Bra022041.1-P | Field mustard | cytosol | 37.86 | 38.81 |
| VIT_01s0011g03390.t01 | Wine grape | cytosol | 39.32 | 38.21 |
| CDY43977 | Canola | cytosol | 23.3 | 38.1 |
| CDX87716 | Canola | cytosol | 23.3 | 38.1 |
| Zm00001d034346_P002 | Maize | mitochondrion | 47.09 | 37.6 |
| TraesCS5B01G425200.1 | Wheat | cytosol | 44.17 | 36.69 |
| CDX87707 | Canola | cytosol | 21.36 | 32.12 |
| HORVU5Hr1G103320.2 | Barley | nucleus, plastid | 43.2 | 30.69 |
| VIT_11s0052g00240.t01 | Wine grape | cytosol | 46.6 | 24.55 |
Protein Annotations
| Gene3D:1.10.3520.10 | EntrezGene:100266751 | wikigene:100266751 | MapMan:5.4.6 | ProteinID:CCB44679 | ProteinID:CCB44679.1 |
| UniProt:F6GXJ3 | EMBL:FN594964 | InterPro:GLTP_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0120009 | GO:GO:0120013 | InterPro:Glycolipid_transfer_prot_dom | InterPro:IPR036497 | EntrezGene:LOC100266751 |
| wikigene:LOC100266751 | PFAM:PF08718 | PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 | SUPFAM:SSF110004 | UniParc:UPI00019844E8 |
| ArrayExpress:VIT_11s0052g00260 | EnsemblPlantsGene:VIT_11s0052g00260 | EnsemblPlants:VIT_11s0052g00260.t01 | unigene:Vvi.18071 | RefSeq:XP_002263172 | RefSeq:XP_002263172.1 |
Description
No Description!
Coordinates
chr11:-:17422165..17423188
Molecular Weight (calculated)
22749.6 Da
IEP (calculated)
9.670
GRAVY (calculated)
-0.077
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKNSGILTT VADAFSEVAQ TVNSPRPYVE IGRLVRACRL LSPLLSSLGV FKFAEKEFSA KVDDLAEAEK SVHTLESLLH SDIRKNCEKD SNSHSRNLVR
101: VKRSVDMLKI MFEQILARGG NSIVGPVSTA YKQVFAPYHG WLIRTGVSAA MITLPTKAQL LRNLNEDEAT ANVQMQKYVT ASASVLQYID KLFRSRCSGN
201: ELLGMV
101: VKRSVDMLKI MFEQILARGG NSIVGPVSTA YKQVFAPYHG WLIRTGVSAA MITLPTKAQL LRNLNEDEAT ANVQMQKYVT ASASVLQYID KLFRSRCSGN
201: ELLGMV
001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
Arabidopsis Description
ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.