CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022041.1-P	Field mustard	cytosol	100.0	100.0
CDX87706	Canola	cytosol	37.31	86.21
CDX87707	Canola	cytosol	56.72	83.21
CDX87716	Canola	cytosol	38.81	61.9
CDY43977	Canola	cytosol	38.81	61.9
CDX79572	Canola	cytosol	55.22	53.88
CDX84289	Canola	cytosol	26.87	51.92
CDX84635	Canola	cytosol, endoplasmic reticulum, peroxisome	52.74	51.46
KRH36758	Soybean	cytosol	50.75	49.51
KRH11758	Soybean	cytosol	50.75	49.04
VIT_10s0003g04580.t01	Wine grape	cytosol	49.75	48.78
GSMUA_Achr5P02430_001	Banana	endoplasmic reticulum, extracellular	42.29	48.57
EER90780	Sorghum	cytosol	49.25	48.06
TraesCS5A01G423200.1	Wheat	cytosol	46.27	45.15
TraesCS5D01G431800.1	Wheat	cytosol	46.27	44.71
PGSC0003DMT400054370	Potato	cytosol	46.27	44.29
Solyc02g070250.2.1	Tomato	cytosol	46.27	44.29
Os03t0784900-01	Rice	cytosol	44.78	43.48
Zm00001d034346_P002	Maize	mitochondrion	49.25	38.37
VIT_11s0052g00260.t01	Wine grape	cytosol, plastid	38.81	37.86
TraesCS5B01G425200.1	Wheat	cytosol	45.77	37.1
VIT_11s0052g00280.t01	Wine grape	cytosol	37.81	36.72
CDX96005	Canola	cytosol	15.42	35.63
HORVU5Hr1G103320.2	Barley	nucleus, plastid	46.27	32.07
VIT_11s0052g00220.t01	Wine grape	cytosol	22.39	31.69
CDY38602	Canola	cytosol	35.32	31.56
CDX90348	Canola	cytosol	34.33	30.53
CDY63450	Canola	cytosol	33.83	30.09
VIT_11s0052g00230.t01	Wine grape	cytosol	32.84	28.7
CDX96006	Canola	cytosol	12.94	19.55
VIT_11s0052g00240.t01	Wine grape	cytosol	31.84	16.37

Protein Annotations

Gene3D:1.10.3520.10	MapMan:5.4.6	GO:A0A078HZE7	UniProt:A0A078HZE7	EnsemblPlants:CDY43980	ProteinID:CDY43980
ProteinID:CDY43980.1	InterPro:GLTP_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0120009	GO:GO:0120013	EnsemblPlantsGene:GSBRNA2T00079369001	InterPro:Glycolipid_transfer_prot_dom	InterPro:IPR036497	PFAM:PF08718
PANTHER:PTHR10219	PANTHER:PTHR10219:SF28	SUPFAM:SSF110004	UniParc:UPI0002545D74	:	:

Description

BnaA02g24580DBnaA02g24580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZE7]

Coordinates

chrLK032575:+:216155..217930

Molecular Weight (calculated)

22427.1 Da

IEP (calculated)

6.352

GRAVY (calculated)

0.054

Length

201 amino acids

Sequence
(BLAST)

001: MASKGIVDAF KELAVIVNTP GLDVPVKNFS DACSRFFVVF KVLKTGMFPR FAEIDYVTKV NDLAEASNLT PTLELMVDRD IEANCVRKVG SHTRNLLRIK
101: RSLEMMRVMC EVLLDTESDH SLRDATFTAY NQVFAPHHGW AIQQAVATGI GSLLPKTLLS GMFNETEETF KIHAQSYVTA SASVTNYLDN LFLSKNLGID
201: W

Best Arabidopsis Sequence Match ( AT2G34690.1 )
(BLAST)

001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW

Arabidopsis Description

ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.