Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004321.1-P | Field mustard | cytosol | 85.71 | 44.88 |
| CDY38602 | Canola | cytosol | 69.92 | 41.33 |
| CDY63450 | Canola | cytosol | 50.38 | 29.65 |
| CDX90348 | Canola | cytosol | 49.62 | 29.2 |
| PGSC0003DMT400028452 | Potato | cytosol | 36.09 | 23.3 |
| VIT_01s0011g03390.t01 | Wine grape | cytosol | 36.84 | 23.11 |
| Solyc12g033130.1.1 | Tomato | cytosol | 35.34 | 22.82 |
| GSMUA_Achr9P28440_001 | Banana | cytosol | 34.59 | 21.4 |
| KRH35966 | Soybean | cytosol | 32.33 | 20.38 |
| KRG90803 | Soybean | cytosol | 30.08 | 19.32 |
| CDX87707 | Canola | cytosol | 18.05 | 17.52 |
| CDX79572 | Canola | cytosol | 27.07 | 17.48 |
| CDX84635 | Canola | cytosol, endoplasmic reticulum, peroxisome | 26.32 | 16.99 |
| TraesCS4A01G268800.1 | Wheat | cytosol | 28.57 | 16.67 |
| TraesCS4B01G045400.1 | Wheat | cytosol | 28.57 | 16.67 |
| TraesCS4D01G045300.1 | Wheat | cytosol | 28.57 | 16.67 |
| Zm00001d033718_P001 | Maize | cytosol | 29.32 | 16.6 |
| Os03t0710700-00 | Rice | cytosol | 28.57 | 16.38 |
| EER91001 | Sorghum | mitochondrion | 28.57 | 16.24 |
| HORVU4Hr1G007360.7 | Barley | cytosol | 27.82 | 13.26 |
| CDY43980 | Canola | cytosol | 19.55 | 12.94 |
| CDX96005 | Canola | cytosol | 2.26 | 3.45 |
| CDX87706 | Canola | cytosol | 2.26 | 3.45 |
| CDX84289 | Canola | cytosol | 0.75 | 0.96 |
| CDY43977 | Canola | cytosol | 0.75 | 0.79 |
| CDX87716 | Canola | cytosol | 0.75 | 0.79 |
Protein Annotations
| EnsemblPlants:CDX96006 | EnsemblPlantsGene:GSBRNA2T00102036001 | Gene3D:1.10.3520.10 | GO:A0A078E3T8 | InterPro:GLTP_sf | InterPro:IPR036497 |
| PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 | ProteinID:CDX96006 | ProteinID:CDX96006.1 | SUPFAM:SSF110004 | UniParc:UPI0004EF30D7 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA07g27250D
Coordinates
chrLK031892:-:557195..557692
Molecular Weight (calculated)
15203.2 Da
IEP (calculated)
5.028
GRAVY (calculated)
-0.265
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQEEEVFKV FATVSAKLYN KEEYTKDKSN MEKDMIEDAR FNTPLLVITE AFEDLADLLK PRRQKRGEIG RNGVVSNDGL RLDAFCSACT HVSVLFGCLG
101: FAFKFAEMEY VSKVRDLVEA SKTFDTFRPG YVT
101: FAFKFAEMEY VSKVRDLVEA SKTFDTFRPG YVT
001: MEDFGFTTAL RSESVYIVFR FISSSSLSYN TLSSAFIRLD WIKTPRHRAA SRALGIQSNG QICTACPHLS ALFGFLSVAS CFPSNKDDGL HTRIYFDLEF
101: QPDSAVF
101: QPDSAVF
Arabidopsis Description
ORF107DUncharacterized mitochondrial protein AtMg00720 [Source:UniProtKB/Swiss-Prot;Acc:P92513]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.