Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G045300.1 | Wheat | cytosol | 99.56 | 99.56 |
| TraesCS4A01G268800.1 | Wheat | cytosol | 99.56 | 99.56 |
| EER91001 | Sorghum | mitochondrion | 87.28 | 85.04 |
| Zm00001d033718_P001 | Maize | cytosol | 84.65 | 82.13 |
| Os03t0710700-00 | Rice | cytosol | 82.89 | 81.47 |
| CDX96005 | Canola | cytosol | 26.75 | 70.11 |
| HORVU4Hr1G007360.7 | Barley | cytosol | 83.33 | 68.1 |
| GSMUA_Achr9P28440_001 | Banana | cytosol | 64.04 | 67.91 |
| PGSC0003DMT400028452 | Potato | cytosol | 54.82 | 60.68 |
| KRG90803 | Soybean | cytosol | 54.82 | 60.39 |
| Solyc12g033130.1.1 | Tomato | cytosol | 53.95 | 59.71 |
| VIT_01s0011g03390.t01 | Wine grape | cytosol | 54.39 | 58.49 |
| KRH35966 | Soybean | cytosol | 53.95 | 58.29 |
| CDX90348 | Canola | cytosol | 56.14 | 56.64 |
| Bra010670.1-P | Field mustard | cytosol | 56.14 | 56.64 |
| AT4G39670.1 | Thale cress | cytosol | 56.58 | 56.33 |
| CDY38602 | Canola | cytosol | 55.26 | 56.0 |
| Bra033633.1-P | Field mustard | cytosol | 55.7 | 55.95 |
| CDY63450 | Canola | cytosol | 55.26 | 55.75 |
| Bra004321.1-P | Field mustard | cytosol | 55.7 | 50.0 |
| TraesCS5B01G425200.1 | Wheat | cytosol | 42.54 | 39.11 |
| CDX96006 | Canola | cytosol | 16.67 | 28.57 |
Protein Annotations
| Gene3D:1.10.3520.10 | MapMan:5.4.6 | InterPro:GLTP_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0120009 | GO:GO:0120013 | InterPro:Glycolipid_transfer_prot_dom | InterPro:IPR036497 |
| PFAM:PF08718 | PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 | SUPFAM:SSF110004 | EnsemblPlantsGene:TraesCS4B01G045400 | EnsemblPlants:TraesCS4B01G045400.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:32496484..32498047
Molecular Weight (calculated)
25075.0 Da
IEP (calculated)
4.743
GRAVY (calculated)
-0.072
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAFRGQRPA PSEEMCDAAA AVVAARQGME QPLTAVAEAF EELARGMEAD GGELRLAPFG DTCALVSVLF SSLGIAFKFA ESEYVTKVND LIGASKEYAT
101: LNDILDKDVE NDSVKKQGSH SRNLRRVRLG LGLIKALFEQ FLATEGGSLY DAATTAYGQV CAPFHSWAIR KAVGAGMYTL PSREQLIMRL NETDCSVQKE
201: MRRYIDASSP IIEYIDNLFL SRNIVLDW
101: LNDILDKDVE NDSVKKQGSH SRNLRRVRLG LGLIKALFEQ FLATEGGSLY DAATTAYGQV CAPFHSWAIR KAVGAGMYTL PSREQLIMRL NETDCSVQKE
201: MRRYIDASSP IIEYIDNLFL SRNIVLDW
001: MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW
Arabidopsis Description
ACD11 homolog protein [Source:UniProtKB/Swiss-Prot;Acc:Q8L7U7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.