Factsheet for Bra004321.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96005	Canola	cytosol	32.68	95.4
CDY38602	Canola	cytosol	81.89	92.44
CDX96006	Canola	cytosol	44.88	85.71
Bra010670.1-P	Field mustard	cytosol	70.08	78.76
Bra033633.1-P	Field mustard	cytosol	68.5	76.65
PGSC0003DMT400028452	Potato	cytosol	53.54	66.02
Solyc12g033130.1.1	Tomato	cytosol	52.36	64.56
KRH35966	Soybean	cytosol	52.76	63.51
KRG90803	Soybean	cytosol	51.57	63.28
VIT_01s0011g03390.t01	Wine grape	cytosol	52.36	62.74
GSMUA_Achr9P28440_001	Banana	cytosol	50.0	59.07
TraesCS4B01G045400.1	Wheat	cytosol	50.0	55.7
TraesCS4A01G268800.1	Wheat	cytosol	50.0	55.7
TraesCS4D01G045300.1	Wheat	cytosol	50.0	55.7
EER91001	Sorghum	mitochondrion	50.0	54.27
Zm00001d033718_P001	Maize	cytosol	50.0	54.04
Os03t0710700-00	Rice	cytosol	49.21	53.88
HORVU4Hr1G007360.7	Barley	cytosol	48.82	44.44
Bra022985.1-P	Field mustard	cytosol	25.2	43.24
Bra022038.1-P	Field mustard	cytosol	30.71	39.59
Bra022041.1-P	Field mustard	cytosol	27.17	34.33

Protein Annotations

Gene3D:1.10.3520.10	MapMan:5.4.6	EnsemblPlantsGene:Bra004321	EnsemblPlants:Bra004321.1	EnsemblPlants:Bra004321.1-P	InterPro:GLTP_sf
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0120009	GO:GO:0120013
InterPro:Glycolipid_transfer_prot_dom	InterPro:IPR036497	UniProt:M4CJD7	PFAM:PF08718	PANTHER:PTHR10219	PANTHER:PTHR10219:SF28
SUPFAM:SSF110004	UniParc:UPI0002541754	:	:	:	:

Description

AT4G39670 (E=6e-097) | glycolipid binding / glycolipid transporter

Coordinates

chrA07:+:17984604..17985564

Molecular Weight (calculated)

29535.5 Da

IEP (calculated)

7.378

GRAVY (calculated)

-0.320

Length

254 amino acids

Sequence
(BLAST)

001: MFQEEEVFKV FATVSAKLYN KEEYTKDKSN MEKDMIGDAR FNTPLLVITE AFEDLADLLK PRRQKREIGR NGVVSNDGLR LDAFCSACTH VSVLFGCLGF
101: AFKFAEMEYV SKVRDLVEAS KTFDTLHNII DLDVMNQTVK TQGSYSRNLR RVRLGLDLIR AIFEQFLMTN EYYSLKDAAT KAYTQVCAPF HTWGVRTAVY
201: AGMYTLPTRD QLLLRLNETD QSVEKNMRRY MEASRPIIEY IDKLYIDRNI KLDW

Best Arabidopsis Sequence Match ( AT4G39670.1 )
(BLAST)

001: MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW

Arabidopsis Description

ACD11 homolog protein [Source:UniProtKB/Swiss-Prot;Acc:Q8L7U7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.