Factsheet for Os03t0710700-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0643000-01
Os04t0534400-01
Os08t0156700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39670.1	Os02t0643000-01	AT3G60600.1	18845362
AT4G39670.1	Os04t0534400-01	AT3G60600.1	18845362
AT4G39670.1	Os08t0156700-01	AT3G60600.1	18845362

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G045300.1	Wheat	cytosol	81.47	82.89
TraesCS4B01G045400.1	Wheat	cytosol	81.47	82.89
TraesCS4A01G268800.1	Wheat	cytosol	81.47	82.89
EER91001	Sorghum	mitochondrion	81.47	80.77
Zm00001d033718_P001	Maize	cytosol	79.31	78.3
CDX96005	Canola	cytosol	25.86	68.97
GSMUA_Achr9P28440_001	Banana	cytosol	62.93	67.91
HORVU4Hr1G007360.7	Barley	cytosol	73.28	60.93
PGSC0003DMT400028452	Potato	cytosol	53.02	59.71
Solyc12g033130.1.1	Tomato	cytosol	52.16	58.74
VIT_01s0011g03390.t01	Wine grape	cytosol	53.45	58.49
KRG90803	Soybean	cytosol	52.16	58.45
KRH35966	Soybean	cytosol	51.29	56.4
AT4G39670.1	Thale cress	cytosol	54.74	55.46
CDX90348	Canola	cytosol	53.88	55.31
Bra010670.1-P	Field mustard	cytosol	53.88	55.31
CDY38602	Canola	cytosol	53.45	55.11
Bra033633.1-P	Field mustard	cytosol	53.88	55.07
CDY63450	Canola	cytosol	53.02	54.42
Bra004321.1-P	Field mustard	cytosol	53.88	49.21
Os03t0784900-01	Rice	cytosol	41.38	46.38
Os08t0556300-01	Rice	cytosol	28.45	30.7
CDX96006	Canola	cytosol	16.38	28.57

Protein Annotations

Gene3D:1.10.3520.10	EntrezGene:4333879	MapMan:5.4.6	ProteinID:ABF98504.1	ProteinID:BAF12964.2	ProteinID:BAS86015.1
InterPro:GLTP_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0120009	GO:GO:0120013	InterPro:Glycolipid_transfer_prot_dom	InterPro:IPR036497	EnsemblPlantsGene:Os03g0710700	EnsemblPlants:Os03t0710700-00
PFAM:PF08718	PANTHER:PTHR10219	PANTHER:PTHR10219:SF28	UniProt:Q10E24	SUPFAM:SSF110004	UniParc:UPI000009CF8E
RefSeq:XP_015628899.1	SEG:seg	:	:	:	:

Description

Similar to predicted protein. (Os03t0710700-00)

Coordinates

chr3:-:28655240..28657433

Molecular Weight (calculated)

25421.5 Da

IEP (calculated)

5.131

GRAVY (calculated)

0.009

Length

232 amino acids

Sequence
(BLAST)

001: MLGFRSQTPW SGAGAEPICG DAAAAVVAAR KGMETPLTAV AEAFEELARR MEADGGELRL GPFGDTCALV SVLFSCLGMA FRFAEIEYVA KVNDLIGAAK
101: SYGTLNDILD KDVENDCVKK QGSHSRNLRR VRLGLGLIKV LFEQFLSTQE CSLYDAATTA YGQVCAPFHS WAVRKAVGAG MYTLPSREQL IVRLNETDCS
201: VQKEMRRYID ASSPIIDYID NLFLSRSISL DW

Best Arabidopsis Sequence Match ( AT4G39670.1 )
(BLAST)

001: MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW

Arabidopsis Description

ACD11 homolog protein [Source:UniProtKB/Swiss-Prot;Acc:Q8L7U7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.