Factsheet for HORVU4Hr1G007360.7

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G091830.4
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39670.1	HORVU2Hr1G091830.4	AT3G60600.1	18845362
AT4G39670.1	HORVU6Hr1G060760.3	AT3G60600.1	18845362
AT4G39670.1	HORVU7Hr1G071270.2	AT3G60600.1	18845362

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G045300.1	Wheat	cytosol	68.1	83.33
TraesCS4B01G045400.1	Wheat	cytosol	68.1	83.33
TraesCS4A01G268800.1	Wheat	cytosol	68.1	83.33
EER91001	Sorghum	mitochondrion	62.01	73.93
Os03t0710700-00	Rice	cytosol	60.93	73.28
Zm00001d033718_P001	Maize	cytosol	60.57	71.91
CDX96005	Canola	cytosol	21.51	68.97
GSMUA_Achr9P28440_001	Banana	cytosol	50.9	66.05
PGSC0003DMT400028452	Potato	cytosol	43.73	59.22
KRG90803	Soybean	cytosol	43.37	58.45
Solyc12g033130.1.1	Tomato	cytosol	43.01	58.25
VIT_01s0011g03390.t01	Wine grape	cytosol	44.09	58.02
KRH35966	Soybean	cytosol	42.65	56.4
CDY38602	Canola	cytosol	45.16	56.0
AT4G39670.1	Thale cress	cytosol	44.44	54.15
CDX90348	Canola	cytosol	43.73	53.98
Bra010670.1-P	Field mustard	cytosol	43.73	53.98
Bra033633.1-P	Field mustard	cytosol	43.37	53.3
CDY63450	Canola	cytosol	43.01	53.1
Bra004321.1-P	Field mustard	cytosol	44.44	48.82
HORVU5Hr1G103320.2	Barley	nucleus, plastid	34.77	33.45
CDX96006	Canola	cytosol	13.26	27.82

Protein Annotations

Gene3D:1.10.3520.10	MapMan:5.4.6	UniProt:A0A287N348	InterPro:GLTP_sf	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0120009	GO:GO:0120013	InterPro:Glycolipid_transfer_prot_dom
EnsemblPlantsGene:HORVU4Hr1G007360	EnsemblPlants:HORVU4Hr1G007360.7	InterPro:IPR036497	PFAM:PF08718	PANTHER:PTHR10219	PANTHER:PTHR10219:SF28
SUPFAM:SSF110004	UniParc:UPI000B46BCA0	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:19144158..19145627

Molecular Weight (calculated)

31221.5 Da

IEP (calculated)

7.620

GRAVY (calculated)

-0.061

Length

279 amino acids

Sequence
(BLAST)

001: MEQPLTAVAE AFEELARGME ADGGELRLAP FGDTCALVSV LFNSLGIAFK FAESEYVTKV NDLIGASREY ATLNDILDKD VENDSVKKQG SHSRNLRRVR
101: LGLGLIKALF EQFLATEYVS PLIHPLTHSL IRSFQHSANL SLALPRWHHQ QRRQMLCAAI NGGLVHHHQF CANKIILDSA NGRTTAYTLS GVWFFRGGSL
201: YDAATTAYGQ VCAPFHSWAI RKAVGAGMYT LPSREQLIMR LNETDCSVQK EMRRYIDASS PIIVYIDNLF LSRNIVLDW

Best Arabidopsis Sequence Match ( AT4G39670.1 )
(BLAST)

001: MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW

Arabidopsis Description

ACD11 homolog protein [Source:UniProtKB/Swiss-Prot;Acc:Q8L7U7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.