Factsheet for HORVU5Hr1G103320.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G028520.1
HORVU2Hr1G091830.4
HORVU3Hr1G018940.2
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34690.1	HORVU1Hr1G028520.1	AT1G55190.1	18845362
AT2G34690.1	HORVU3Hr1G018940.2	AT1G55190.1	18845362
AT2G34690.1	HORVU1Hr1G028520.1	AT3G13720.1	18845362
AT2G34690.1	HORVU3Hr1G018940.2	AT3G13720.1	18845362
AT2G34690.1	HORVU2Hr1G091830.4	AT3G60600.1	18845362
AT2G34690.1	HORVU6Hr1G060760.3	AT3G60600.1	18845362
AT2G34690.1	HORVU7Hr1G071270.2	AT3G60600.1	18845362

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G423200.1	Wheat	cytosol	69.31	97.57
TraesCS5D01G431800.1	Wheat	cytosol	69.31	96.63
Os03t0784900-01	Rice	cytosol	60.34	84.54
EER90780	Sorghum	cytosol	60.0	84.47
TraesCS5B01G425200.1	Wheat	cytosol	68.97	80.65
GSMUA_Achr5P02430_001	Banana	endoplasmic reticulum, extracellular	44.83	74.29
Zm00001d034346_P002	Maize	mitochondrion	61.72	69.38
KRH11758	Soybean	cytosol	46.55	64.9
AT2G34690.1	Thale cress	cytosol	45.86	64.56
KRH36758	Soybean	cytosol	45.86	64.56
Solyc02g070250.2.1	Tomato	cytosol	45.17	62.38
Bra022985.1-P	Field mustard	cytosol	31.72	62.16
PGSC0003DMT400054370	Potato	cytosol	44.48	61.43
CDX79572	Canola	cytosol	43.45	61.16
CDX84635	Canola	cytosol, endoplasmic reticulum, peroxisome	42.07	59.22
VIT_10s0003g04580.t01	Wine grape	cytosol	41.03	58.05
CDY43977	Canola	cytosol	23.45	53.97
CDX84289	Canola	cytosol	19.31	53.85
CDX87716	Canola	cytosol	23.1	53.17
Bra022038.1-P	Field mustard	cytosol	34.83	51.27
CDY43980	Canola	cytosol	32.07	46.27
Bra022041.1-P	Field mustard	cytosol	32.07	46.27
VIT_11s0052g00280.t01	Wine grape	cytosol	32.76	45.89
CDX87706	Canola	cytosol	13.45	44.83
VIT_11s0052g00260.t01	Wine grape	cytosol, plastid	30.69	43.2
CDX87707	Canola	cytosol	17.59	37.23
VIT_11s0052g00220.t01	Wine grape	cytosol	17.93	36.62
HORVU4Hr1G007360.7	Barley	cytosol	33.45	34.77
VIT_11s0052g00230.t01	Wine grape	cytosol	26.55	33.48
VIT_11s0052g00240.t01	Wine grape	cytosol	32.07	23.79

Protein Annotations

Gene3D:1.10.3520.10	MapMan:5.4.6	UniProt:A0A287SJ27	InterPro:GLTP_sf	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006950
GO:GO:0008150	GO:GO:0008219	GO:GO:0009605	GO:GO:0009607	GO:GO:0009719	GO:GO:0009751
GO:GO:0009816	GO:GO:0009987	GO:GO:0010175	GO:GO:0015695	GO:GO:0015791	GO:GO:0016043
GO:GO:0072488	GO:GO:0120009	GO:GO:0120013	InterPro:Glycolipid_transfer_prot_dom	EnsemblPlantsGene:HORVU5Hr1G103320	EnsemblPlants:HORVU5Hr1G103320.2
InterPro:IPR036497	PFAM:PF08718	PANTHER:PTHR10219	PANTHER:PTHR10219:SF28	SUPFAM:SSF110004	UniParc:UPI000B4763E1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:615395844..615398626

Molecular Weight (calculated)

31680.9 Da

IEP (calculated)

10.313

GRAVY (calculated)

-0.508

Length

290 amino acids

Sequence
(BLAST)

001: MVQDGPSPLS GPSEDRPTPK PRRHRRRPLH TTTRTTTKRT RHLTTERGGE REKKRAQLIS PDADATQALE PPSAADAGGG GDRPMGSNEA DKPLRRIGAS
101: FEQLAAIAKQ QQQPAMAAGD FSRACSNVSV LFGCLGIAFK FAEMDYVAKV NDLLEASKTI STLPSMVELD IQKGTVRQPG SHTRNLLRVK RGIDMVKVLF
201: EQILVTEGNS LKDAATKAYA QVFAPHHGWA IRKAVGAGMY ALPSKSQLLK KLNEDENSAR AQMQSFVRSS GQVILYVEDL FTSSNLGLDW

Best Arabidopsis Sequence Match ( AT2G34690.1 )
(BLAST)

001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW

Arabidopsis Description

ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.