Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_09s0002g02400.t01 | |
| VIT_15s0048g00220.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34690.1 | VIT_09s0002g02400.t01 | AT1G55190.1 | 18845362 |
| AT2G34690.1 | VIT_09s0002g02400.t01 | AT3G13720.1 | 18845362 |
| AT2G34690.1 | VIT_15s0048g00220.t01 | AT3G60600.1 | 18845362 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0052g00260.t01 | Wine grape | cytosol, plastid | 61.35 | 61.65 |
| GSMUA_Achr5P02430_001 | Banana | endoplasmic reticulum, extracellular | 44.44 | 52.57 |
| VIT_11s0052g00220.t01 | Wine grape | cytosol | 35.27 | 51.41 |
| VIT_10s0003g04580.t01 | Wine grape | cytosol | 49.76 | 50.24 |
| PGSC0003DMT400054370 | Potato | cytosol | 50.24 | 49.52 |
| AT2G34690.1 | Thale cress | cytosol | 49.28 | 49.51 |
| Solyc02g070250.2.1 | Tomato | cytosol | 49.76 | 49.05 |
| VIT_11s0052g00230.t01 | Wine grape | cytosol | 54.11 | 48.7 |
| KRH11758 | Soybean | cytosol | 48.79 | 48.56 |
| KRH36758 | Soybean | cytosol | 48.31 | 48.54 |
| CDX79572 | Canola | cytosol | 47.83 | 48.06 |
| EER90780 | Sorghum | cytosol | 47.34 | 47.57 |
| Os03t0784900-01 | Rice | cytosol | 47.34 | 47.34 |
| CDX84635 | Canola | cytosol, endoplasmic reticulum, peroxisome | 46.86 | 47.09 |
| TraesCS5A01G423200.1 | Wheat | cytosol | 46.86 | 47.09 |
| TraesCS5D01G431800.1 | Wheat | cytosol | 46.86 | 46.63 |
| Bra022985.1-P | Field mustard | cytosol | 32.37 | 45.27 |
| CDX84289 | Canola | cytosol | 20.77 | 41.35 |
| VIT_01s0011g03390.t01 | Wine grape | cytosol | 40.58 | 39.62 |
| Zm00001d034346_P002 | Maize | mitochondrion | 49.28 | 39.53 |
| TraesCS5B01G425200.1 | Wheat | cytosol | 47.34 | 39.52 |
| Bra022038.1-P | Field mustard | cytosol | 37.2 | 39.09 |
| CDY43980 | Canola | cytosol | 36.72 | 37.81 |
| Bra022041.1-P | Field mustard | cytosol | 36.72 | 37.81 |
| CDY43977 | Canola | cytosol | 22.71 | 37.3 |
| CDX87716 | Canola | cytosol | 22.71 | 37.3 |
| CDX87706 | Canola | cytosol | 14.98 | 35.63 |
| CDX87707 | Canola | cytosol | 22.71 | 34.31 |
| HORVU5Hr1G103320.2 | Barley | nucleus, plastid | 45.89 | 32.76 |
| VIT_11s0052g00240.t01 | Wine grape | cytosol | 53.14 | 28.13 |
Protein Annotations
| Gene3D:1.10.3520.10 | EntrezGene:100242716 | wikigene:100242716 | MapMan:5.4.6 | ProteinID:CBI17893 | ProteinID:CBI17893.3 |
| UniProt:D7SQG2 | EMBL:FN594964 | InterPro:GLTP_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0120009 | GO:GO:0120013 | InterPro:Glycolipid_transfer_prot_dom | InterPro:IPR036497 | EntrezGene:LOC100242716 |
| wikigene:LOC100242716 | PFAM:PF08718 | PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 | SUPFAM:SSF110004 | UniParc:UPI00015CC4B9 |
| ArrayExpress:VIT_11s0052g00280 | EnsemblPlantsGene:VIT_11s0052g00280 | EnsemblPlants:VIT_11s0052g00280.t01 | unigene:Vvi.24820 | RefSeq:XP_002263003 | RefSeq:XP_002263003.1 |
| RefSeq:XP_010656881.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:17458617..17461298
Molecular Weight (calculated)
23008.0 Da
IEP (calculated)
9.793
GRAVY (calculated)
0.043
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARDRPLTK IADAFIELAE SLNSPNPRLE VSQFARACRL VSPLIGFLGI AFKFVEIEFS SKVDNLMEAS RYVSTLDAMI DREIGLNCAK SSNSNSRNLV
101: RVKRSIDMLK VIFEQILARR GNSIMGPVST AYQQVFAPYH GWAIRTAVSA SLPTLPTKAR LMKKLNENEA TVNAQMQNFV VTSAPIIQYI ENLFHSRVSG
201: DEILGLI
101: RVKRSIDMLK VIFEQILARR GNSIMGPVST AYQQVFAPYH GWAIRTAVSA SLPTLPTKAR LMKKLNENEA TVNAQMQNFV VTSAPIIQYI ENLFHSRVSG
201: DEILGLI
001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
Arabidopsis Description
ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.