Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_15s0048g00220.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G39670.1 | VIT_15s0048g00220.t01 | AT3G60600.1 | 18845362 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400028452 | Potato | cytosol | 66.04 | 67.96 |
| CDX96005 | Canola | cytosol | 27.83 | 67.82 |
| Solyc12g033130.1.1 | Tomato | cytosol | 65.09 | 66.99 |
| KRG90803 | Soybean | cytosol | 64.15 | 65.7 |
| KRH35966 | Soybean | cytosol | 64.62 | 64.93 |
| GSMUA_Achr9P28440_001 | Banana | cytosol | 63.21 | 62.33 |
| CDY38602 | Canola | cytosol | 63.21 | 59.56 |
| Bra010670.1-P | Field mustard | cytosol | 61.32 | 57.52 |
| CDX90348 | Canola | cytosol | 61.32 | 57.52 |
| AT4G39670.1 | Thale cress | cytosol | 61.79 | 57.21 |
| CDY63450 | Canola | cytosol | 60.85 | 57.08 |
| Bra033633.1-P | Field mustard | cytosol | 59.43 | 55.51 |
| TraesCS4A01G268800.1 | Wheat | cytosol | 58.49 | 54.39 |
| TraesCS4B01G045400.1 | Wheat | cytosol | 58.49 | 54.39 |
| TraesCS4D01G045300.1 | Wheat | cytosol | 58.49 | 54.39 |
| Os03t0710700-00 | Rice | cytosol | 58.49 | 53.45 |
| EER91001 | Sorghum | mitochondrion | 58.49 | 52.99 |
| Bra004321.1-P | Field mustard | cytosol | 62.74 | 52.36 |
| Zm00001d033718_P001 | Maize | cytosol | 57.55 | 51.91 |
| VIT_10s0003g04580.t01 | Wine grape | cytosol | 50.0 | 51.71 |
| HORVU4Hr1G007360.7 | Barley | cytosol | 58.02 | 44.09 |
| VIT_11s0052g00220.t01 | Wine grape | cytosol | 28.3 | 42.25 |
| VIT_11s0052g00280.t01 | Wine grape | cytosol | 39.62 | 40.58 |
| VIT_11s0052g00260.t01 | Wine grape | cytosol, plastid | 38.21 | 39.32 |
| CDX96006 | Canola | cytosol | 23.11 | 36.84 |
| VIT_11s0052g00230.t01 | Wine grape | cytosol | 32.55 | 30.0 |
| VIT_11s0052g00240.t01 | Wine grape | cytosol | 33.02 | 17.9 |
Protein Annotations
| Gene3D:1.10.3520.10 | EntrezGene:100256114 | wikigene:100256114 | MapMan:5.4.6 | ProteinID:CCB50922 | ProteinID:CCB50922.1 |
| ncoils:Coil | UniProt:F6HEX7 | EMBL:FN595752 | InterPro:GLTP_sf | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0120009 | GO:GO:0120013 | InterPro:Glycolipid_transfer_prot_dom |
| InterPro:IPR036497 | EntrezGene:LOC100256114 | wikigene:LOC100256114 | PFAM:PF08718 | PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 |
| SUPFAM:SSF110004 | TIGR:TC56967 | UniParc:UPI00015C7E2F | ArrayExpress:VIT_01s0011g03390 | EnsemblPlantsGene:VIT_01s0011g03390 | EnsemblPlants:VIT_01s0011g03390.t01 |
| unigene:Vvi.5142 | RefSeq:XP_002282300 | RefSeq:XP_002282300.2 | RefSeq:XP_002282300.3 | : | : |
Description
No Description!
Coordinates
chr1:-:3065990..3068987
Molecular Weight (calculated)
23932.7 Da
IEP (calculated)
5.123
GRAVY (calculated)
-0.045
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNMAQEEES VKATPLAAMA EAFEELSKLV KTCPSYHLRL ITFCDACSLV SVLFGCLGIA FKFAELEYVS KIRDLLEASK TYDTLEDIID RDIENNTVRS
101: AGSHSRNLRR VRQGLDLIRA LFEQFLLSDD FSLREAASAA YSQVCAPYHT WAVRTAVSAG MYALPVREQL LVRLNENGQS AEKQMRRYIN ASLPVIAYID
201: ELYMARNISL DW
101: AGSHSRNLRR VRQGLDLIRA LFEQFLLSDD FSLREAASAA YSQVCAPYHT WAVRTAVSAG MYALPVREQL LVRLNENGQS AEKQMRRYIN ASLPVIAYID
201: ELYMARNISL DW
001: MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW
Arabidopsis Description
ACD11 homolog protein [Source:UniProtKB/Swiss-Prot;Acc:Q8L7U7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.